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An Information Portal to 110790 Biological Macromolecular Structures

Crystal structure of p19 complexed with 19-bp small interfering RNA
Sequence Clustering and Redundancy Reduction Results
1R9F
Sequence Clusters for the Sequence Entities in PDB 1R9F
Entity #1: Chains: B - 5'-R(*CP*GP*UP*AP*CP*GP*CP*GP*GP*AP*AP*UP*AP*CP*UP*UP*CP*GP*AP*UP*U)-3' rna, length: 21 [Blast  ]
Cluster Sequence Similarity Cutoff Rank   Nr. of chains in Cluster Cluster Nr.  
Entity #2: Chains: C - 5'-R(*UP*CP*GP*AP*AP*GP*UP*AP*UP*UP*CP*CP*GP*CP*GP*UP*AP*CP*GP*UP*U)-3' rna, length: 21 [Blast  ]
Cluster Sequence Similarity Cutoff Rank   Nr. of chains in Cluster Cluster Nr.  
Entity #3: Chains: A - Core protein P19 protein, length: 136 [Blast  ]
Cluster Sequence Similarity Cutoff Rank   Nr. of chains in Cluster Cluster Nr.  
100% 1 2 23162
95% 4 9 5145
90% 4 9 5150
70% 4 9 5056
50% 4 9 4782
40% 4 9 4486
30% 4 9 4064
 

Documentation

Click here for more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB.