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An Information Portal to 110790 Biological Macromolecular Structures

APPBP1-UBA3-NEDD8, an E1-ubiquitin-like protein complex with ATP
Sequence Clustering and Redundancy Reduction Results
1R4N
Sequence Clusters for the Sequence Entities in PDB 1R4N
Entity #1: Chains: A,C,E,G - amyloid beta precursor protein-binding protein 1 protein, length: 529 [Blast  ]
Cluster Sequence Similarity Cutoff Rank   Nr. of chains in Cluster Cluster Nr.  
100% 6 6 1595
95% 9 9 1644
90% 9 9 1685
70% 9 9 1697
50% 9 9 1743
40% 9 9 1767
30% 9 9 1689
Entity #2: Chains: B,D,F,H - ubiquitin-activating enzyme E1C protein, length: 431 [Blast  ]
Cluster Sequence Similarity Cutoff Rank   Nr. of chains in Cluster Cluster Nr.  
100% 3 3 3603
95% 8 8 1711
90% 8 8 1754
70% 8 8 1774
50% 8 8 1811
40% 8 8 1836
30% 8 8 1752
Entity #3: Chains: I,J,K,L - Ubiquitin-like protein NEDD8 protein, length: 76 [Blast  ]
Cluster Sequence Similarity Cutoff Rank   Nr. of chains in Cluster Cluster Nr.  
100% 9 10 1679
95% 13 14 1204
90% 13 14 1225
70% 13 15 1203
50% 222 303 15
40% 234 324 17
30% 454 775 10
 

Documentation

Click here for more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB.