Sequence Similarity Clusters for the Entities in PDB 1R4N

Entity #1 | Chains: A,C,E,G
amyloid beta precursor protein-binding protein 1 protein, length: 529 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 6 6 1825
95 % 9 9 1855
90 % 9 9 1897
70 % 9 9 1926
50 % 9 9 1944
40 % 9 9 1957
30 % 9 9 1877
Entity #2 | Chains: B,D,F,H
ubiquitin-activating enzyme E1C protein, length: 431 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 3 3 4098
95 % 8 8 1921
90 % 8 8 1969
70 % 8 8 2003
50 % 8 8 2016
40 % 8 8 2028
30 % 8 8 1944
Entity #3 | Chains: I,J,K,L
Ubiquitin-like protein NEDD8 protein, length: 76 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 11 13 1495
95 % 15 17 1207
90 % 15 17 1225
70 % 15 18 1211
50 % 267 361 13
40 % 279 383 17
30 % 524 868 9

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.