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APPBP1-UBA3-NEDD8, an E1-ubiquitin-like protein complex with ATP
Sequence Clustering and Redundancy Reduction Results
1R4N
Sequence Clusters for the Sequence Entities in PDB 1R4N
Entity #1: Chains: A,C,E,G - amyloid beta precursor protein-binding protein 1 protein, length: 529 [Blast  ]
Cluster Sequence Similarity Cutoff Rank   Nr. of chains in Cluster Cluster Nr.  
100% 6 6 1400
95% 9 9 1434
90% 9 9 1475
70% 9 9 1512
50% 9 9 1588
40% 9 9 1627
30% 9 9 1570
Entity #2: Chains: B,D,F,H - ubiquitin-activating enzyme E1C protein, length: 431 [Blast  ]
Cluster Sequence Similarity Cutoff Rank   Nr. of chains in Cluster Cluster Nr.  
100% 3 3 3233
95% 8 8 1489
90% 8 8 1538
70% 8 8 1576
50% 8 8 1650
40% 8 8 1692
30% 8 8 1638
Entity #3: Chains: I,J,K,L - Ubiquitin-like protein NEDD8 protein, length: 76 [Blast  ]
Cluster Sequence Similarity Cutoff Rank   Nr. of chains in Cluster Cluster Nr.  
100% 9 10 1476
95% 13 14 1046
90% 13 14 1068
70% 13 15 1051
50% 192 265 19
40% 204 286 24
30% 409 719 10
 

Documentation

Click here for more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB.