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APPBP1-UBA3-NEDD8, an E1-ubiquitin-like protein complex with ATP
Sequence Clustering and Redundancy Reduction Results
1R4N
Sequence Clusters for the Sequence Entities in PDB 1R4N
Entity #1: Chains: A,C,E,G - amyloid beta precursor protein-binding protein 1 protein, length: 529 [Blast  ]
Cluster Sequence Similarity Cutoff Rank   Nr. of chains in Cluster Cluster Nr.  
100% 6 6 1389
95% 9 9 1425
90% 9 9 1468
70% 9 9 1504
50% 9 9 1578
40% 9 9 1612
30% 9 9 1560
Entity #2: Chains: B,D,F,H - ubiquitin-activating enzyme E1C protein, length: 431 [Blast  ]
Cluster Sequence Similarity Cutoff Rank   Nr. of chains in Cluster Cluster Nr.  
100% 3 3 3214
95% 8 8 1480
90% 8 8 1530
70% 8 8 1566
50% 8 8 1637
40% 8 8 1675
30% 8 8 1626
Entity #3: Chains: I,J,K,L - Ubiquitin-like protein NEDD8 protein, length: 76 [Blast  ]
Cluster Sequence Similarity Cutoff Rank   Nr. of chains in Cluster Cluster Nr.  
100% 9 10 1462
95% 13 14 1038
90% 13 14 1061
70% 13 15 1042
50% 192 265 19
40% 204 286 24
30% 408 718 10
 

Documentation

Click here for more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB.