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APPBP1-UBA3-NEDD8, an E1-ubiquitin-like protein complex with ATP
Sequence Clustering and Redundancy Reduction Results
1R4N
Sequence Clusters for the Sequence Entities in PDB 1R4N
Entity #1: Chains: A,C,E,G - amyloid beta precursor protein-binding protein 1 protein, length: 529 [Blast  ]
Cluster Sequence Similarity Cutoff Rank   Nr. of chains in Cluster Cluster Nr.  
100% 6 6 1531
95% 9 9 1573
90% 9 9 1616
70% 9 9 1633
50% 9 9 1676
40% 9 9 1707
30% 9 9 1634
Entity #2: Chains: B,D,F,H - ubiquitin-activating enzyme E1C protein, length: 431 [Blast  ]
Cluster Sequence Similarity Cutoff Rank   Nr. of chains in Cluster Cluster Nr.  
100% 3 3 3422
95% 8 8 1631
90% 8 8 1676
70% 8 8 1698
50% 8 8 1739
40% 8 8 1774
30% 8 8 1702
Entity #3: Chains: I,J,K,L - Ubiquitin-like protein NEDD8 protein, length: 76 [Blast  ]
Cluster Sequence Similarity Cutoff Rank   Nr. of chains in Cluster Cluster Nr.  
100% 9 10 1609
95% 13 14 1160
90% 13 14 1178
70% 13 15 1162
50% 203 280 18
40% 215 301 22
30% 432 748 10
 

Documentation

Click here for more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB.