Sequence Similarity Clusters for the Entities in PDB 1QSH

Entity #1 | Chains: A,C
PROTEIN (HEMOGLOBIN ALPHA CHAIN) protein, length: 141 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 24 200 24
95 % 29 231 18
90 % 29 231 19
70 % 36 311 15
50 % 88 706 4
40 % 89 711 8
30 % 279 1133 7
Entity #2 | Chains: B,D
PROTEIN (HEMOGLOBIN BETA CHAIN) protein, length: 146 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 24 153 50
95 % 28 231 17
90 % 28 236 18
70 % 35 325 9
50 % 89 706 4
40 % 90 711 8
30 % 280 1133 7

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.