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FOOT-AND-MOUTH DISEASE VIRUS/ OLIGOSACCHARIDE RECEPTOR COMPLEX.
Sequence Clustering and Redundancy Reduction Results
1QQP
Sequence Clusters for the Sequence Entities in PDB 1QQP
Entity #1: Chains: 1 - PROTEIN (GENOME POLYPROTEIN) protein, length: 213 [Blast  ]
Cluster Sequence Similarity Cutoff Rank   Nr. of chains in Cluster Cluster Nr.  
100% 1 1 49528
95% 1 3 18674
90% 1 3 18119
70% 1 10 5494
50% 1 11 4728
40% 1 11 4437
30% 1 11 4015
Entity #2: Chains: 2 - PROTEIN (GENOME POLYPROTEIN) protein, length: 218 [Blast  ]
Cluster Sequence Similarity Cutoff Rank   Nr. of chains in Cluster Cluster Nr.  
100% 1 3 22134
95% 1 3 18582
90% 1 3 18060
70% 1 11 4994
50% 1 11 4729
40% 1 11 4438
30% 4 157 155
Entity #3: Chains: 3 - PROTEIN (GENOME POLYPROTEIN) protein, length: 220 [Blast  ]
Cluster Sequence Similarity Cutoff Rank   Nr. of chains in Cluster Cluster Nr.  
100% 1 3 22067
95% 1 3 18542
90% 1 3 18031
70% 1 10 5479
50% 1 11 4725
40% 1 21 276
30% 4 162 138
Entity #4: Chains: 4 - PROTEIN (GENOME POLYPROTEIN) protein, length: 85 [Blast  ]
Cluster Sequence Similarity Cutoff Rank   Nr. of chains in Cluster Cluster Nr.  
100% 1 2 38774
95% 1 9 6424
90% 1 9 6395
70% 1 9 6223
50% 1 9 5795
40% 1 9 5414
30% 1 16 565
 

Documentation

Click here for more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB.