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An Information Portal to 107049 Biological Macromolecular Structures

FOOT-AND-MOUTH DISEASE VIRUS/ OLIGOSACCHARIDE RECEPTOR COMPLEX.
Sequence Clustering and Redundancy Reduction Results
1QQP
Sequence Clusters for the Sequence Entities in PDB 1QQP
Entity #1: Chains: 1 - PROTEIN (GENOME POLYPROTEIN) protein, length: 213 [Blast  ]
Cluster Sequence Similarity Cutoff Rank   Nr. of chains in Cluster Cluster Nr.  
100% 1 1 47763
95% 1 3 18025
90% 1 3 17496
70% 1 10 5311
50% 1 11 4565
40% 1 11 4289
30% 1 11 3884
Entity #2: Chains: 2 - PROTEIN (GENOME POLYPROTEIN) protein, length: 218 [Blast  ]
Cluster Sequence Similarity Cutoff Rank   Nr. of chains in Cluster Cluster Nr.  
100% 1 3 21345
95% 1 3 17936
90% 1 3 17439
70% 1 11 4802
50% 1 11 4566
40% 1 11 4290
30% 4 157 143
Entity #3: Chains: 3 - PROTEIN (GENOME POLYPROTEIN) protein, length: 220 [Blast  ]
Cluster Sequence Similarity Cutoff Rank   Nr. of chains in Cluster Cluster Nr.  
100% 1 3 21279
95% 1 3 17897
90% 1 3 17411
70% 1 10 5298
50% 1 11 4562
40% 1 21 269
30% 4 160 128
Entity #4: Chains: 4 - PROTEIN (GENOME POLYPROTEIN) protein, length: 85 [Blast  ]
Cluster Sequence Similarity Cutoff Rank   Nr. of chains in Cluster Cluster Nr.  
100% 1 2 37332
95% 1 9 6199
90% 1 9 6183
70% 1 9 6019
50% 1 9 5610
40% 1 9 5240
30% 1 16 541
 

Documentation

Click here for more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB.