POP-OUT | CLOSE

An Information Portal to 107620 Biological Macromolecular Structures

FOOT-AND-MOUTH DISEASE VIRUS/ OLIGOSACCHARIDE RECEPTOR COMPLEX.
Sequence Clustering and Redundancy Reduction Results
1QQP
Sequence Clusters for the Sequence Entities in PDB 1QQP
Entity #1: Chains: 1 - PROTEIN (GENOME POLYPROTEIN) protein, length: 213 [Blast  ]
Cluster Sequence Similarity Cutoff Rank   Nr. of chains in Cluster Cluster Nr.  
100% 1 1 48008
95% 1 3 18099
90% 1 3 17566
70% 1 10 5350
50% 1 11 4588
40% 1 11 4308
30% 1 11 3902
Entity #2: Chains: 2 - PROTEIN (GENOME POLYPROTEIN) protein, length: 218 [Blast  ]
Cluster Sequence Similarity Cutoff Rank   Nr. of chains in Cluster Cluster Nr.  
100% 1 3 21452
95% 1 3 18010
90% 1 3 17509
70% 1 11 4842
50% 1 11 4589
40% 1 11 4309
30% 4 157 143
Entity #3: Chains: 3 - PROTEIN (GENOME POLYPROTEIN) protein, length: 220 [Blast  ]
Cluster Sequence Similarity Cutoff Rank   Nr. of chains in Cluster Cluster Nr.  
100% 1 3 21386
95% 1 3 17971
90% 1 3 17481
70% 1 10 5337
50% 1 11 4585
40% 1 21 273
30% 4 160 130
Entity #4: Chains: 4 - PROTEIN (GENOME POLYPROTEIN) protein, length: 85 [Blast  ]
Cluster Sequence Similarity Cutoff Rank   Nr. of chains in Cluster Cluster Nr.  
100% 1 2 37521
95% 1 9 6231
90% 1 9 6211
70% 1 9 6048
50% 1 9 5636
40% 1 9 5258
30% 1 16 543
 

Documentation

Click here for more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB.