Sequence Similarity Clusters for the Entities in PDB 1QQP

Entity #1 | Chains: 1
PROTEIN (GENOME POLYPROTEIN) protein, length: 213 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 1 52023
95 % 1 3 19672
90 % 1 3 19057
70 % 1 13 4250
50 % 1 15 3569
40 % 1 15 3421
30 % 1 15 3169
Entity #2 | Chains: 2
PROTEIN (GENOME POLYPROTEIN) protein, length: 218 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 3 23343
95 % 1 5 12145
90 % 1 5 11935
70 % 1 15 3683
50 % 1 15 3570
40 % 1 15 3422
30 % 4 169 154
Entity #3 | Chains: 3
PROTEIN (GENOME POLYPROTEIN) protein, length: 220 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 3 23273
95 % 1 5 12132
90 % 1 5 11923
70 % 1 13 4247
50 % 1 15 3566
40 % 1 25 280
30 % 4 176 141
Entity #4 | Chains: 4
PROTEIN (GENOME POLYPROTEIN) protein, length: 85 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 2 40783
95 % 1 13 4343
90 % 1 13 4375
70 % 1 13 4338
50 % 1 13 4176
40 % 1 13 3976
30 % 1 20 576

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.