Sequence Similarity Clusters for the Entities in PDB 1QQP

Entity #1 | Chains: 1
PROTEIN (GENOME POLYPROTEIN) protein, length: 213 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 1 53854
95 % 1 3 20379
90 % 1 3 19740
70 % 1 13 4403
50 % 1 15 3712
40 % 1 15 3550
30 % 1 15 3289
Entity #2 | Chains: 2
PROTEIN (GENOME POLYPROTEIN) protein, length: 218 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 3 24232
95 % 1 5 12651
90 % 1 5 12429
70 % 1 15 3818
50 % 1 15 3713
40 % 1 15 3551
30 % 4 172 159
Entity #3 | Chains: 3
PROTEIN (GENOME POLYPROTEIN) protein, length: 220 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 3 24161
95 % 1 5 12637
90 % 1 5 12416
70 % 1 13 4399
50 % 1 15 3709
40 % 1 27 287
30 % 4 179 149
Entity #4 | Chains: 4
PROTEIN (GENOME POLYPROTEIN) protein, length: 85 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 2 42225
95 % 1 13 4517
90 % 1 13 4540
70 % 1 13 4499
50 % 1 13 4334
40 % 1 13 4123
30 % 1 20 619

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.