Sequence Similarity Clusters for the Entities in PDB 1QQP

Entity #1 | Chains: 1
PROTEIN (GENOME POLYPROTEIN) protein, length: 213 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 1 57465
95 % 1 3 21762
90 % 1 3 21078
70 % 1 13 4723
50 % 1 15 3973
40 % 1 15 3799
30 % 1 15 3509
Entity #2 | Chains: 2
PROTEIN (GENOME POLYPROTEIN) protein, length: 218 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 3 25986
95 % 1 5 13508
90 % 1 5 13277
70 % 1 15 4098
50 % 1 15 3974
40 % 1 15 3800
30 % 4 178 168
Entity #3 | Chains: 3
PROTEIN (GENOME POLYPROTEIN) protein, length: 220 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 3 25909
95 % 1 5 13492
90 % 1 5 13262
70 % 1 13 4718
50 % 1 15 3970
40 % 1 27 324
30 % 4 189 151
Entity #4 | Chains: 4
PROTEIN (GENOME POLYPROTEIN) protein, length: 85 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 2 45108
95 % 1 13 4862
90 % 1 13 4880
70 % 1 13 4817
50 % 1 13 4636
40 % 1 13 4402
30 % 1 20 675

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.