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FOOT-AND-MOUTH DISEASE VIRUS/ OLIGOSACCHARIDE RECEPTOR COMPLEX.
Sequence Clustering and Redundancy Reduction Results
1QQP
Sequence Clusters for the Sequence Entities in PDB 1QQP
Entity #1: Chains: 1 - PROTEIN (GENOME POLYPROTEIN) protein, length: 213 [Blast  ]
Cluster Sequence Similarity Cutoff Rank   Nr. of chains in Cluster Cluster Nr.  
100% 1 1 47355
95% 1 3 17877
90% 1 3 17357
70% 1 10 5257
50% 1 11 4540
40% 1 11 4262
30% 1 11 3864
Entity #2: Chains: 2 - PROTEIN (GENOME POLYPROTEIN) protein, length: 218 [Blast  ]
Cluster Sequence Similarity Cutoff Rank   Nr. of chains in Cluster Cluster Nr.  
100% 1 3 21132
95% 1 3 17790
90% 1 3 17301
70% 1 11 4755
50% 1 11 4541
40% 1 11 4263
30% 4 155 140
Entity #3: Chains: 3 - PROTEIN (GENOME POLYPROTEIN) protein, length: 220 [Blast  ]
Cluster Sequence Similarity Cutoff Rank   Nr. of chains in Cluster Cluster Nr.  
100% 1 3 21066
95% 1 3 17751
90% 1 3 17273
70% 1 10 5244
50% 1 11 4537
40% 1 21 268
30% 4 158 129
Entity #4: Chains: 4 - PROTEIN (GENOME POLYPROTEIN) protein, length: 85 [Blast  ]
Cluster Sequence Similarity Cutoff Rank   Nr. of chains in Cluster Cluster Nr.  
100% 1 2 37011
95% 1 9 6147
90% 1 9 6131
70% 1 9 5972
50% 1 9 5571
40% 1 9 5200
30% 1 16 536
 

Documentation

Click here for more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB.