Sequence Similarity Clusters for the Entities in PDB 1QQP

Entity #1 | Chains: 1
PROTEIN (GENOME POLYPROTEIN) protein, length: 213 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 1 53473
95 % 1 3 20210
90 % 1 3 19585
70 % 1 13 4363
50 % 1 15 3668
40 % 1 15 3517
30 % 1 15 3257
Entity #2 | Chains: 2
PROTEIN (GENOME POLYPROTEIN) protein, length: 218 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 3 24029
95 % 1 5 12526
90 % 1 5 12302
70 % 1 15 3777
50 % 1 15 3669
40 % 1 15 3518
30 % 4 169 158
Entity #3 | Chains: 3
PROTEIN (GENOME POLYPROTEIN) protein, length: 220 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 3 23958
95 % 1 5 12512
90 % 1 5 12289
70 % 1 13 4359
50 % 1 15 3665
40 % 1 25 290
30 % 4 177 146
Entity #4 | Chains: 4
PROTEIN (GENOME POLYPROTEIN) protein, length: 85 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 2 41913
95 % 1 13 4471
90 % 1 13 4496
70 % 1 13 4454
50 % 1 13 4292
40 % 1 13 4088
30 % 1 20 607

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.