Sequence Similarity Clusters for the Entities in PDB 1QQP

Entity #1 | Chains: 1
PROTEIN (GENOME POLYPROTEIN) protein, length: 213 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 1 54602
95 % 1 3 20636
90 % 1 3 19987
70 % 1 13 4455
50 % 1 15 3760
40 % 1 15 3594
30 % 1 15 3323
Entity #2 | Chains: 2
PROTEIN (GENOME POLYPROTEIN) protein, length: 218 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 3 24591
95 % 1 5 12839
90 % 1 5 12621
70 % 1 15 3857
50 % 1 15 3761
40 % 1 15 3595
30 % 4 173 161
Entity #3 | Chains: 3
PROTEIN (GENOME POLYPROTEIN) protein, length: 220 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 3 24520
95 % 1 5 12824
90 % 1 5 12607
70 % 1 13 4451
50 % 1 15 3757
40 % 1 27 298
30 % 4 181 146
Entity #4 | Chains: 4
PROTEIN (GENOME POLYPROTEIN) protein, length: 85 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 2 42774
95 % 1 13 4578
90 % 1 13 4597
70 % 1 13 4553
50 % 1 13 4387
40 % 1 13 4175
30 % 1 20 632

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.