Sequence Similarity Clusters for the Entities in PDB 1QQP

Entity #1 | Chains: 1
PROTEIN (GENOME POLYPROTEIN) protein, length: 213 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 1 53149
95 % 1 3 20094
90 % 1 3 19471
70 % 1 13 4341
50 % 1 15 3652
40 % 1 15 3501
30 % 1 15 3242
Entity #2 | Chains: 2
PROTEIN (GENOME POLYPROTEIN) protein, length: 218 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 3 23885
95 % 1 5 12424
90 % 1 5 12208
70 % 1 15 3760
50 % 1 15 3653
40 % 1 15 3502
30 % 4 169 157
Entity #3 | Chains: 3
PROTEIN (GENOME POLYPROTEIN) protein, length: 220 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 3 23814
95 % 1 5 12410
90 % 1 5 12195
70 % 1 13 4337
50 % 1 15 3649
40 % 1 25 290
30 % 4 177 146
Entity #4 | Chains: 4
PROTEIN (GENOME POLYPROTEIN) protein, length: 85 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 2 41667
95 % 1 13 4441
90 % 1 13 4469
70 % 1 13 4428
50 % 1 13 4267
40 % 1 13 4062
30 % 1 20 594

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.