Sequence Similarity Clusters for the Entities in PDB 1QQP

Entity #1 | Chains: 1
PROTEIN (GENOME POLYPROTEIN) protein, length: 213 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 1 56574
95 % 1 3 21432
90 % 1 3 20758
70 % 1 13 4644
50 % 1 15 3914
40 % 1 15 3744
30 % 1 15 3459
Entity #2 | Chains: 2
PROTEIN (GENOME POLYPROTEIN) protein, length: 218 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 3 25575
95 % 1 5 13322
90 % 1 5 13097
70 % 1 15 4037
50 % 1 15 3915
40 % 1 15 3745
30 % 4 178 163
Entity #3 | Chains: 3
PROTEIN (GENOME POLYPROTEIN) protein, length: 220 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 3 25500
95 % 1 5 13307
90 % 1 5 13082
70 % 1 13 4639
50 % 1 15 3911
40 % 1 27 317
30 % 4 188 148
Entity #4 | Chains: 4
PROTEIN (GENOME POLYPROTEIN) protein, length: 85 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 2 44396
95 % 1 13 4779
90 % 1 13 4801
70 % 1 13 4741
50 % 1 13 4557
40 % 1 13 4337
30 % 1 20 667

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.