Sequence Similarity Clusters for the Entities in PDB 1QO1

Entity #1 | Chains: A,B,C
ATP SYNTHASE ALPHA CHAIN protein, length: 510 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 28 29 246
95 % 40 41 242
90 % 40 41 252
70 % 55 56 153
50 % 62 63 166
40 % 62 63 183
30 % 62 63 195
Entity #2 | Chains: D,E,F
ATP SYNTHASE BETA CHAIN protein, length: 482 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 39 40 179
95 % 41 42 243
90 % 41 42 253
70 % 63 64 138
50 % 63 64 167
40 % 63 64 184
30 % 63 64 196
Entity #3 | Chains: G
ATP SYNTHASE GAMMA CHAIN protein, length: 272 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 38 39 765
95 % 38 39 1053
90 % 38 39 1075
70 % 40 41 1064
50 % 40 41 1112
40 % 56 57 624
30 % 56 57 635
Entity #4 | Chains: J
ATP SYNTHASE DELTA CHAIN protein, length: 138 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 4 6 6389
95 % 4 6 6968
90 % 4 6 6934
70 % 4 6 6729
50 % 4 6 6246
40 % 4 6 5829
30 % 9 11 3344
Entity #5 | Chains: K,L,M,N,O,P,Q,R,S,T
ATP SYNTHASE PROTEIN 9 protein, length: 79 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 2 6 1457
95 % 4 9 1693
90 % 4 9 1734
70 % 4 9 1765
50 % 4 9 1810
40 % 4 9 1830
30 % 48 53 65

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.