Sequence Similarity Clusters for the Entities in PDB 1QO1

Entity #1 | Chains: A,B,C
ATP SYNTHASE ALPHA CHAIN protein, length: 510 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 28 29 264
95 % 40 41 257
90 % 40 41 265
70 % 58 59 160
50 % 70 71 157
40 % 70 71 173
30 % 70 71 188
Entity #2 | Chains: D,E,F
ATP SYNTHASE BETA CHAIN protein, length: 482 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 39 40 189
95 % 41 42 258
90 % 41 42 266
70 % 71 72 130
50 % 71 72 158
40 % 71 72 174
30 % 71 72 189
Entity #3 | Chains: G
ATP SYNTHASE GAMMA CHAIN protein, length: 272 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 38 39 815
95 % 38 39 1120
90 % 38 39 1145
70 % 40 41 1126
50 % 40 41 1181
40 % 64 65 593
30 % 64 65 588
Entity #4 | Chains: J
ATP SYNTHASE DELTA CHAIN protein, length: 138 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 7 9 4920
95 % 7 9 5553
90 % 7 9 5557
70 % 7 9 5444
50 % 7 9 5139
40 % 7 9 4841
30 % 14 16 2431
Entity #5 | Chains: K,L,M,N,O,P,Q,R,S,T
ATP SYNTHASE PROTEIN 9 protein, length: 79 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 5 9 612
95 % 7 12 786
90 % 7 12 818
70 % 7 12 859
50 % 7 12 897
40 % 7 12 926
30 % 54 59 64

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.