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Molecular Architecture of the Rotary Motor in ATP Synthase from Yeast Mitochondria
Sequence Clustering and Redundancy Reduction Results
1QO1
Sequence Clusters for the Sequence Entities in PDB 1QO1
Entity #1: Chains: A,B,C - ATP SYNTHASE ALPHA CHAIN protein, length: 510 [Blast  ]
Cluster Sequence Similarity Cutoff Rank   Nr. of chains in Cluster Cluster Nr.  
100% 21 22 315
95% 33 34 261
90% 33 34 274
70% 45 46 135
50% 51 52 153
40% 51 52 176
30% 51 52 193
Entity #2: Chains: D,E,F - ATP SYNTHASE BETA CHAIN protein, length: 482 [Blast  ]
Cluster Sequence Similarity Cutoff Rank   Nr. of chains in Cluster Cluster Nr.  
100% 32 33 191
95% 34 35 262
90% 34 35 275
70% 52 53 113
50% 52 53 154
40% 52 53 177
30% 52 53 194
Entity #3: Chains: G - ATP SYNTHASE GAMMA CHAIN protein, length: 272 [Blast  ]
Cluster Sequence Similarity Cutoff Rank   Nr. of chains in Cluster Cluster Nr.  
100% 31 32 828
95% 31 32 1153
90% 31 32 1170
70% 33 34 1137
50% 33 34 1195
40% 44 45 700
30% 46 47 632
Entity #4: Chains: J - ATP SYNTHASE DELTA CHAIN protein, length: 138 [Blast  ]
Cluster Sequence Similarity Cutoff Rank   Nr. of chains in Cluster Cluster Nr.  
100% 4 6 5599
95% 4 6 6204
90% 4 6 6176
70% 4 6 6031
50% 4 6 5625
40% 4 6 5245
30% 8 10 3198
Entity #5: Chains: K,L,M,N,O,P,Q,R,S,T - ATP SYNTHASE PROTEIN 9 protein, length: 79 [Blast  ]
Cluster Sequence Similarity Cutoff Rank   Nr. of chains in Cluster Cluster Nr.  
100% 2 6 1287
95% 4 9 1501
90% 4 9 1537
70% 4 9 1559
50% 4 9 1610
40% 4 9 1641
30% 4 9 1580
 

Documentation

Click here for more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB.