Sequence Similarity Clusters for the Entities in PDB 1QO1

Entity #1 | Chains: A,B,C
ATP SYNTHASE ALPHA CHAIN protein, length: 510 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 28 29 275
95 % 40 41 264
90 % 40 41 273
70 % 58 59 164
50 % 70 71 161
40 % 70 71 178
30 % 70 71 193
Entity #2 | Chains: D,E,F
ATP SYNTHASE BETA CHAIN protein, length: 482 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 39 40 197
95 % 41 42 265
90 % 41 42 274
70 % 71 72 135
50 % 71 72 162
40 % 71 72 179
30 % 71 72 194
Entity #3 | Chains: G
ATP SYNTHASE GAMMA CHAIN protein, length: 272 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 38 39 837
95 % 38 39 1142
90 % 38 39 1171
70 % 40 41 1145
50 % 40 41 1200
40 % 64 65 604
30 % 64 65 601
Entity #4 | Chains: J
ATP SYNTHASE DELTA CHAIN protein, length: 138 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 7 9 5028
95 % 7 9 5668
90 % 7 9 5668
70 % 7 9 5543
50 % 7 9 5228
40 % 7 9 4917
30 % 14 16 2477
Entity #5 | Chains: K,L,M,N,O,P,Q,R,S,T
ATP SYNTHASE PROTEIN 9 protein, length: 79 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 5 9 645
95 % 7 12 819
90 % 7 12 848
70 % 7 12 884
50 % 7 12 924
40 % 7 12 945
30 % 54 59 66

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.