Sequence Similarity Clusters for the Entities in PDB 1QO1

Entity #1 | Chains: A,B,C
ATP SYNTHASE ALPHA CHAIN protein, length: 510 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 28 29 271
95 % 40 41 261
90 % 40 41 270
70 % 58 59 162
50 % 70 71 159
40 % 70 71 175
30 % 70 71 191
Entity #2 | Chains: D,E,F
ATP SYNTHASE BETA CHAIN protein, length: 482 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 39 40 193
95 % 41 42 262
90 % 41 42 271
70 % 71 72 132
50 % 71 72 160
40 % 71 72 176
30 % 71 72 192
Entity #3 | Chains: G
ATP SYNTHASE GAMMA CHAIN protein, length: 272 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 38 39 832
95 % 38 39 1135
90 % 38 39 1162
70 % 40 41 1139
50 % 40 41 1195
40 % 64 65 598
30 % 64 65 593
Entity #4 | Chains: J
ATP SYNTHASE DELTA CHAIN protein, length: 138 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 7 9 4976
95 % 7 9 5608
90 % 7 9 5611
70 % 7 9 5494
50 % 7 9 5188
40 % 7 9 4882
30 % 14 16 2453
Entity #5 | Chains: K,L,M,N,O,P,Q,R,S,T
ATP SYNTHASE PROTEIN 9 protein, length: 79 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 5 9 634
95 % 7 12 813
90 % 7 12 842
70 % 7 12 877
50 % 7 12 915
40 % 7 12 939
30 % 54 59 66

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.