Sequence Similarity Clusters for the Entities in PDB 1QO1

Entity #1 | Chains: A,B,C
ATP SYNTHASE ALPHA CHAIN protein, length: 510 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 28 29 249
95 % 40 41 243
90 % 40 41 252
70 % 55 56 157
50 % 64 65 161
40 % 64 65 176
30 % 64 65 190
Entity #2 | Chains: D,E,F
ATP SYNTHASE BETA CHAIN protein, length: 482 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 39 40 180
95 % 41 42 244
90 % 41 42 253
70 % 65 66 135
50 % 65 66 162
40 % 65 66 177
30 % 65 66 191
Entity #3 | Chains: G
ATP SYNTHASE GAMMA CHAIN protein, length: 272 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 38 39 773
95 % 38 39 1073
90 % 38 39 1095
70 % 40 41 1088
50 % 40 41 1135
40 % 58 59 594
30 % 58 59 602
Entity #4 | Chains: J
ATP SYNTHASE DELTA CHAIN protein, length: 138 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 4 6 6519
95 % 4 6 7094
90 % 4 6 7060
70 % 4 6 6851
50 % 4 6 6360
40 % 4 6 5933
30 % 11 13 2696
Entity #5 | Chains: K,L,M,N,O,P,Q,R,S,T
ATP SYNTHASE PROTEIN 9 protein, length: 79 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 2 6 1497
95 % 4 9 1741
90 % 4 9 1778
70 % 4 9 1807
50 % 4 9 1847
40 % 4 9 1862
30 % 48 53 69

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.