Sequence Similarity Clusters for the Entities in PDB 1QO1

Entity #1 | Chains: A,B,C
ATP SYNTHASE ALPHA CHAIN protein, length: 510 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 28 29 246
95 % 40 41 221
90 % 40 41 232
70 % 55 56 153
50 % 62 63 166
40 % 62 63 182
30 % 62 63 194
Entity #2 | Chains: D,E,F
ATP SYNTHASE BETA CHAIN protein, length: 482 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 39 40 161
95 % 41 42 222
90 % 41 42 233
70 % 63 64 137
50 % 63 64 167
40 % 63 64 183
30 % 63 64 195
Entity #3 | Chains: G
ATP SYNTHASE GAMMA CHAIN protein, length: 272 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 38 39 761
95 % 38 39 1044
90 % 38 39 1066
70 % 40 41 1056
50 % 40 41 1103
40 % 56 57 618
30 % 56 57 626
Entity #4 | Chains: J
ATP SYNTHASE DELTA CHAIN protein, length: 138 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 4 6 6332
95 % 4 6 6910
90 % 4 6 6872
70 % 4 6 6676
50 % 4 6 6200
40 % 4 6 5789
30 % 9 11 3324
Entity #5 | Chains: K,L,M,N,O,P,Q,R,S,T
ATP SYNTHASE PROTEIN 9 protein, length: 79 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 2 6 1446
95 % 4 9 1683
90 % 4 9 1724
70 % 4 9 1757
50 % 4 9 1797
40 % 4 9 1818
30 % 48 53 65

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.