Sequence Similarity Clusters for the Entities in PDB 1QO1

Entity #1 | Chains: A,B,C
ATP SYNTHASE ALPHA CHAIN protein, length: 510 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 28 29 244
95 % 40 41 215
90 % 40 41 227
70 % 54 55 154
50 % 61 62 166
40 % 61 62 181
30 % 61 62 193
Entity #2 | Chains: D,E,F
ATP SYNTHASE BETA CHAIN protein, length: 482 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 39 40 158
95 % 41 42 216
90 % 41 42 228
70 % 62 63 137
50 % 62 63 167
40 % 62 63 182
30 % 62 63 194
Entity #3 | Chains: G
ATP SYNTHASE GAMMA CHAIN protein, length: 272 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 38 39 743
95 % 38 39 1022
90 % 38 39 1047
70 % 40 41 1037
50 % 40 41 1085
40 % 55 56 608
30 % 55 56 611
Entity #4 | Chains: J
ATP SYNTHASE DELTA CHAIN protein, length: 138 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 4 6 6249
95 % 4 6 6812
90 % 4 6 6774
70 % 4 6 6582
50 % 4 6 6122
40 % 4 6 5716
30 % 9 11 3276
Entity #5 | Chains: K,L,M,N,O,P,Q,R,S,T
ATP SYNTHASE PROTEIN 9 protein, length: 79 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 2 6 1424
95 % 4 9 1658
90 % 4 9 1701
70 % 4 9 1726
50 % 4 9 1770
40 % 4 9 1792
30 % 47 52 65

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.