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An Information Portal to 108957 Biological Macromolecular Structures

Molecular Architecture of the Rotary Motor in ATP Synthase from Yeast Mitochondria
Sequence Clustering and Redundancy Reduction Results
1QO1
Sequence Clusters for the Sequence Entities in PDB 1QO1
Entity #1: Chains: A,B,C - ATP SYNTHASE ALPHA CHAIN protein, length: 510 [Blast  ]
Cluster Sequence Similarity Cutoff Rank   Nr. of chains in Cluster Cluster Nr.  
100% 21 22 316
95% 33 34 262
90% 33 34 275
70% 45 46 152
50% 51 52 155
40% 51 52 177
30% 51 52 194
Entity #2: Chains: D,E,F - ATP SYNTHASE BETA CHAIN protein, length: 482 [Blast  ]
Cluster Sequence Similarity Cutoff Rank   Nr. of chains in Cluster Cluster Nr.  
100% 32 33 191
95% 34 35 263
90% 34 35 276
70% 52 53 117
50% 52 53 156
40% 52 53 178
30% 52 53 195
Entity #3: Chains: G - ATP SYNTHASE GAMMA CHAIN protein, length: 272 [Blast  ]
Cluster Sequence Similarity Cutoff Rank   Nr. of chains in Cluster Cluster Nr.  
100% 31 32 832
95% 31 32 1156
90% 31 32 1173
70% 33 34 1140
50% 33 34 1199
40% 44 45 710
30% 46 47 639
Entity #4: Chains: J - ATP SYNTHASE DELTA CHAIN protein, length: 138 [Blast  ]
Cluster Sequence Similarity Cutoff Rank   Nr. of chains in Cluster Cluster Nr.  
100% 4 6 5621
95% 4 6 6221
90% 4 6 6192
70% 4 6 6046
50% 4 6 5636
40% 4 6 5259
30% 8 10 3205
Entity #5: Chains: K,L,M,N,O,P,Q,R,S,T - ATP SYNTHASE PROTEIN 9 protein, length: 79 [Blast  ]
Cluster Sequence Similarity Cutoff Rank   Nr. of chains in Cluster Cluster Nr.  
100% 2 6 1291
95% 4 9 1508
90% 4 9 1544
70% 4 9 1565
50% 4 9 1614
40% 4 9 1644
30% 4 9 1581
 

Documentation

Click here for more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB.