Sequence Similarity Clusters for the Entities in PDB 1QO1

Entity #1 | Chains: A,B,C
ATP SYNTHASE ALPHA CHAIN protein, length: 510 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 28 29 241
95 % 40 41 204
90 % 40 41 217
70 % 54 55 147
50 % 61 62 159
40 % 61 62 174
30 % 61 62 190
Entity #2 | Chains: D,E,F
ATP SYNTHASE BETA CHAIN protein, length: 482 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 39 40 155
95 % 41 42 205
90 % 41 42 218
70 % 62 63 133
50 % 62 63 160
40 % 62 63 175
30 % 62 63 191
Entity #3 | Chains: G
ATP SYNTHASE GAMMA CHAIN protein, length: 272 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 38 39 725
95 % 38 39 998
90 % 38 39 1023
70 % 40 41 1012
50 % 40 41 1060
40 % 55 56 591
30 % 55 56 590
Entity #4 | Chains: J
ATP SYNTHASE DELTA CHAIN protein, length: 138 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 4 6 6089
95 % 4 6 6667
90 % 4 6 6631
70 % 4 6 6450
50 % 4 6 5995
40 % 4 6 5590
30 % 9 11 3201
Entity #5 | Chains: K,L,M,N,O,P,Q,R,S,T
ATP SYNTHASE PROTEIN 9 protein, length: 79 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 2 6 1385
95 % 4 9 1620
90 % 4 9 1658
70 % 4 9 1684
50 % 4 9 1732
40 % 4 9 1751
30 % 47 52 58

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.