Sequence Similarity Clusters for the Entities in PDB 1QMZ

Entity #1 | Chains: A,C
CELL DIVISION PROTEIN KINASE 2 protein, length: 299 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 266 361 21
95 % 275 376 32 Flexibility: Low
Max RMSD: 7.4, Avg RMSD: 2.2
PDBFlex
90 % 275 376 34
70 % 275 376 42
50 % 288 401 55
40 % 296 457 41
30 % 2052 3732 2
Entity #2 | Chains: B,D
G2/MITOTIC-SPECIFIC CYCLIN A protein, length: 259 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 23 86 158
95 % 36 105 146 Flexibility: No
Max RMSD: 1.4, Avg RMSD: 0.4
PDBFlex
90 % 40 109 151
70 % 40 109 172
50 % 40 109 202
40 % 40 109 225
30 % 43 115 223
Entity #3 | Chains: E,F
SUBSTRATE PEPTIDE protein, length: 7 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.