Sequence Similarity Clusters for the Entities in PDB 1QJV

Entity #1 | Chains: A,B
PECTIN METHYLESTERASE protein, length: 342 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 1 34877
95 % 8 8 3975 Flexibility: No
Max RMSD: 0.5, Avg RMSD: 0.2
PDBFlex
90 % 8 8 4013
70 % 8 8 3966
50 % 8 9 3577
40 % 8 9 3453
30 % 12 13 2639

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.