Sequence Similarity Clusters for the Entities in PDB 1QJV

Entity #1 | Chains: A,B
PECTIN METHYLESTERASE protein, length: 342 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 1 35112
95 % 8 8 4011 Flexibility: No
Max RMSD: 0.5, Avg RMSD: 0.3
PDBFlex
90 % 8 8 4049
70 % 8 8 3992
50 % 8 9 3596
40 % 8 9 3470
30 % 12 13 2657

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.