Sequence Similarity Clusters for the Entities in PDB 1QJV

Entity #1 | Chains: A,B
PECTIN METHYLESTERASE protein, length: 342 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 8 8 3932
95 % 8 8 4282 Flexibility: No
Max RMSD: 0.5, Avg RMSD: 0.2
PDBFlex
90 % 8 8 4326
70 % 8 8 4235
50 % 8 9 3830
40 % 8 9 3640
30 % 12 13 2736

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures