Sequence Similarity Clusters for the Entities in PDB 1QJV

Entity #1 | Chains: A,B
PECTIN METHYLESTERASE protein, length: 342 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 8 8 4193
95 % 8 8 4543 Flexibility: No
Max RMSD: 0.5, Avg RMSD: 0.2
PDBFlex
90 % 8 8 4575
70 % 8 8 4462
50 % 8 9 3995
40 % 8 9 3793
30 % 12 13 2854

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures