Sequence Similarity Clusters for the Entities in PDB 1QGU

Entity #1 | Chains: A,C
PROTEIN (NITROGENASE MOLYBDENUM IRON PROTEIN) protein, length: 478 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 2 4 8192
95 % 2 4 8655 Flexibility: No
Max RMSD: 0.2, Avg RMSD: 0.2
PDBFlex
90 % 2 4 8592
70 % 8 32 688
50 % 8 32 736
40 % 8 32 765
30 % 10 35 665
Entity #2 | Chains: B,D
PROTEIN (NITROGENASE MOLYBDENUM IRON PROTEIN) protein, length: 519 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 2 4 8099
95 % 2 4 8591 Flexibility: No
Max RMSD: 0.3, Avg RMSD: 0.2
PDBFlex
90 % 2 4 8531
70 % 2 4 8209
50 % 8 32 735
40 % 8 32 764
30 % 8 32 767

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures