Sequence Similarity Clusters for the Entities in PDB 1QGU

Entity #1 | Chains: A,C
PROTEIN (NITROGENASE MOLYBDENUM IRON PROTEIN) protein, length: 478 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 2 4 10898
95 % 2 4 10599 Flexibility: No
Max RMSD: 0.2, Avg RMSD: 0.2
PDBFlex
90 % 2 4 10451
70 % 8 33 725
50 % 8 33 774
40 % 8 33 804
30 % 11 41 637
Entity #2 | Chains: B,D
PROTEIN (NITROGENASE MOLYBDENUM IRON PROTEIN) protein, length: 519 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 2 4 9579
95 % 2 4 9521 Flexibility: No
Max RMSD: 0.3, Avg RMSD: 0.2
PDBFlex
90 % 2 4 9403
70 % 2 4 9026
50 % 8 33 771
40 % 8 33 799
30 % 8 33 805

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures