Sequence Similarity Clusters for the Entities in PDB 1QGU

Entity #1 | Chains: A,C
PROTEIN (NITROGENASE MOLYBDENUM IRON PROTEIN) protein, length: 478 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 2 4 10603
95 % 2 4 10305 Flexibility: No
Max RMSD: 0.2, Avg RMSD: 0.2
PDBFlex
90 % 2 4 10167
70 % 8 33 700
50 % 8 33 757
40 % 8 33 786
30 % 11 41 625
Entity #2 | Chains: B,D
PROTEIN (NITROGENASE MOLYBDENUM IRON PROTEIN) protein, length: 519 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 2 4 9317
95 % 2 4 9261 Flexibility: No
Max RMSD: 0.3, Avg RMSD: 0.2
PDBFlex
90 % 2 4 9161
70 % 2 4 8817
50 % 8 33 752
40 % 8 33 782
30 % 8 33 787

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures