Sequence Similarity Clusters for the Entities in PDB 1QBV

Entity #1 | Chains: L
THROMBIN (LIGHT CHAIN) protein, length: 36 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 124 335 45
95 % 124 336 60
90 % 124 336 65
70 % 124 338 76
50 % 124 338 101
40 % 124 338 125
30 % 124 338 137
Entity #2 | Chains: H
THROMBIN (HEAVY CHAIN) protein, length: 259 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 110 290 55
95 % 128 374 35
90 % 128 381 38
70 % 128 405 44
50 % 128 405 78
40 % 781 1684 4
30 % 826 1833 6
Entity #3 | Chains: E
Hirudin protein, length: 11 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.