Sequence Similarity Clusters for the Entities in PDB 1QAB

Entity #1 | Chains: A,B,C,D
PROTEIN (transthyretin) protein, length: 127 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 13 13 1176
95 % 251 252 11
90 % 251 252 12
70 % 257 258 18
50 % 261 262 20
40 % 261 262 28
30 % 272 273 31
Entity #2 | Chains: E,F
PROTEIN (retinol binding protein) protein, length: 180 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 1 37206
95 % 10 10 4401
90 % 23 23 1872
70 % 24 24 1809
50 % 24 24 1844
40 % 24 24 1854
30 % 24 24 1770

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.