Sequence Similarity Clusters for the Entities in PDB 1QAB

Entity #1 | Chains: A,B,C,D
PROTEIN (transthyretin) protein, length: 127 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 13 13 1208
95 % 259 260 11
90 % 259 260 12
70 % 265 266 16
50 % 269 270 19
40 % 269 270 27
30 % 280 281 31
Entity #2 | Chains: E,F
PROTEIN (retinol binding protein) protein, length: 180 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 1 37991
95 % 10 10 4504
90 % 23 23 1918
70 % 24 24 1862
50 % 24 24 1886
40 % 24 24 1894
30 % 24 24 1818

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.