Sequence Similarity Clusters for the Entities in PDB 1QAB

Entity #1 | Chains: A,B,C,D
PROTEIN (transthyretin) protein, length: 127 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 13 13 1220
95 % 260 261 11
90 % 260 261 12
70 % 266 267 16
50 % 270 271 18
40 % 270 271 26
30 % 281 282 32
Entity #2 | Chains: E,F
PROTEIN (retinol binding protein) protein, length: 180 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 1 38394
95 % 10 10 4553
90 % 23 23 1932
70 % 24 24 1879
50 % 24 24 1906
40 % 24 24 1913
30 % 24 24 1837

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.