Sequence Similarity Clusters for the Entities in PDB 1QAB

Entity #1 | Chains: A,B,C,D
PROTEIN (transthyretin) protein, length: 127 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 13 13 1333
95 % 271 273 11
90 % 271 273 12
70 % 277 279 18
50 % 281 283 21
40 % 281 283 29
30 % 292 294 43
Entity #2 | Chains: E,F
PROTEIN (retinol binding protein) protein, length: 180 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 1 40390
95 % 10 10 4828
90 % 23 23 2106
70 % 24 24 2025
50 % 24 24 2016
40 % 24 24 2018
30 % 24 24 1936

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.