Sequence Similarity Clusters for the Entities in PDB 1QAB

Entity #1 | Chains: A,B,C,D
PROTEIN (transthyretin) protein, length: 127 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 13 13 1274
95 % 269 270 10
90 % 269 270 11
70 % 275 276 16
50 % 279 280 17
40 % 279 280 25
30 % 290 291 39
Entity #2 | Chains: E,F
PROTEIN (retinol binding protein) protein, length: 180 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 1 39484
95 % 10 10 4707
90 % 23 23 2042
70 % 24 24 1965
50 % 24 24 1975
40 % 24 24 1972
30 % 24 24 1900

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.