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An Information Portal to 106858 Biological Macromolecular Structures

The structure of human retinol binding protein with its carrier protein transthyretin reveals interaction with the carboxy terminus of RBP
Sequence Clustering and Redundancy Reduction Results
1QAB
Sequence Clusters for the Sequence Entities in PDB 1QAB
Entity #1: Chains: A,B,C,D - PROTEIN (transthyretin) protein, length: 127 [Blast  ]
Cluster Sequence Similarity Cutoff Rank   Nr. of chains in Cluster Cluster Nr.  
100% 13 13 1045
95% 193 194 17
90% 193 194 18
70% 199 200 20
50% 203 204 25
40% 203 204 35
30% 214 215 40
Entity #2: Chains: E,F - PROTEIN (retinol binding protein) protein, length: 180 [Blast  ]
Cluster Sequence Similarity Cutoff Rank   Nr. of chains in Cluster Cluster Nr.  
100% 1 1 32952
95% 10 10 3845
90% 23 23 1651
70% 24 24 1593
50% 24 24 1648
40% 24 24 1672
30% 24 24 1600
 

Documentation

Click here for more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB.