Sequence Similarity Clusters for the Entities in PDB 1Q90

Entity #1 | Chains: A
Apocytochrome f protein, length: 292 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 1 48190
95 % 1 1 34459
90 % 1 1 33031
70 % 1 1 29549
50 % 8 12 3761
40 % 8 12 3600
30 % 8 12 3337
Entity #2 | Chains: B
Cytochrome b6 protein, length: 215 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 1 51709
95 % 1 1 36301
90 % 1 1 34674
70 % 9 13 3681
50 % 9 13 3568
40 % 9 13 3421
30 % 9 13 3168
Entity #3 | Chains: C
Cytochrome B6-F complex iron-sulfur subunit protein, length: 127 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 1 57399
95 % 1 1 39510
90 % 1 1 37651
70 % 2 2 24849
50 % 3 3 15736
40 % 3 3 14074
30 % 3 3 12062
Entity #4 | Chains: D
Cytochrome b6-f complex subunit 4 protein, length: 159 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 1 54813
95 % 1 1 38012
90 % 1 1 36225
70 % 9 13 3704
50 % 9 13 3592
40 % 9 13 3447
30 % 9 13 3191
Entity #5 | Chains: R
Cytochrome B6-F complex iron-sulfur subunit protein, length: 49 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 1 63156
95 % 1 1 43962
90 % 1 1 41923
70 % 1 1 37199
50 % 1 1 31924
40 % 1 1 28181
30 % 1 1 23825
Entity #6 | Chains: G
Cytochrome b6f complex subunit petG protein, length: 37 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 1 63740
95 % 1 1 44486
90 % 1 1 42423
70 % 1 1 37561
50 % 1 1 32227
40 % 1 1 28469
30 % 1 1 24111
Entity #7 | Chains: L
Cytochrome b6f complex subunit petL protein, length: 32 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 1 64043
95 % 1 1 44732
90 % 1 1 42645
70 % 1 1 37747
50 % 1 1 32385
40 % 1 1 28623
30 % 1 1 24265
Entity #8 | Chains: M
Cytochrome b6f complex subunit PETM protein, length: 39 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 1 63629
95 % 1 1 44381
90 % 1 1 42322
70 % 1 1 37476
50 % 1 1 32158
40 % 1 1 28404
30 % 1 1 24046
Entity #9 | Chains: N
Cytochrome b6f complex subunit PETN protein, length: 31 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 1 64114
95 % 1 1 44794
90 % 1 1 42701
70 % 1 1 37798
50 % 1 1 32432
40 % 1 1 28670
30 % 1 1 24312

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.