Sequence Similarity Clusters for the Entities in PDB 1Q90

Entity #1 | Chains: A
Apocytochrome f protein, length: 292 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 1 55752
95 % 1 1 39824
90 % 1 1 38062
70 % 1 1 33829
50 % 8 12 4390
40 % 8 12 4175
30 % 8 12 3848
Entity #2 | Chains: B
Cytochrome b6 protein, length: 215 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 1 59756
95 % 1 1 41887
90 % 1 1 39886
70 % 9 13 4321
50 % 9 13 4161
40 % 9 13 3971
30 % 9 13 3659
Entity #3 | Chains: C
Cytochrome B6-F complex iron-sulfur subunit protein, length: 127 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 1 66082
95 % 1 1 45475
90 % 1 1 43154
70 % 2 2 28572
50 % 3 3 18087
40 % 3 3 16120
30 % 3 3 13783
Entity #4 | Chains: D
Cytochrome b6-f complex subunit 4 protein, length: 159 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 1 63219
95 % 1 1 43795
90 % 1 1 41583
70 % 9 13 4347
50 % 9 13 4187
40 % 9 13 3996
30 % 9 13 3681
Entity #5 | Chains: R
Cytochrome B6-F complex iron-sulfur subunit protein, length: 49 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 1 72351
95 % 1 1 50294
90 % 1 1 47750
70 % 1 1 41965
50 % 1 1 35828
40 % 1 1 31540
30 % 1 1 26654
Entity #6 | Chains: G
Cytochrome b6f complex subunit petG protein, length: 37 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 1 72991
95 % 1 1 50868
90 % 1 1 48301
70 % 1 1 42375
50 % 1 1 36175
40 % 1 1 31868
30 % 1 1 26980
Entity #7 | Chains: L
Cytochrome b6f complex subunit petL protein, length: 32 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 1 73332
95 % 1 1 51144
90 % 1 1 48550
70 % 1 1 42584
50 % 1 1 36351
40 % 1 1 32042
30 % 1 1 27154
Entity #8 | Chains: M
Cytochrome b6f complex subunit PETM protein, length: 39 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 1 72869
95 % 1 1 50753
90 % 1 1 48190
70 % 1 1 42282
50 % 1 1 36099
40 % 1 1 31797
30 % 1 1 26909
Entity #9 | Chains: N
Cytochrome b6f complex subunit PETN protein, length: 31 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 1 73409
95 % 1 1 51211
90 % 1 1 48610
70 % 1 1 42637
50 % 1 1 36400
40 % 1 1 32091
30 % 1 1 27203

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.