Sequence Similarity Clusters for the Entities in PDB 1Q90

Entity #1 | Chains: A
Apocytochrome f protein, length: 292 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 1 51985
95 % 1 1 37080
90 % 1 1 35510
70 % 1 1 31688
50 % 8 12 4078
40 % 8 12 3901
30 % 8 12 3604
Entity #2 | Chains: B
Cytochrome b6 protein, length: 215 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 1 55782
95 % 1 1 39044
90 % 1 1 37258
70 % 9 13 3989
50 % 9 13 3870
40 % 9 13 3703
30 % 9 13 3424
Entity #3 | Chains: C
Cytochrome B6-F complex iron-sulfur subunit protein, length: 127 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 1 61816
95 % 1 1 42459
90 % 1 1 40391
70 % 2 2 26727
50 % 3 3 16933
40 % 3 3 15106
30 % 3 3 12915
Entity #4 | Chains: D
Cytochrome b6-f complex subunit 4 protein, length: 159 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 1 59088
95 % 1 1 40876
90 % 1 1 38897
70 % 9 13 4011
50 % 9 13 3892
40 % 9 13 3728
30 % 9 13 3446
Entity #5 | Chains: R
Cytochrome B6-F complex iron-sulfur subunit protein, length: 49 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 1 67854
95 % 1 1 47129
90 % 1 1 44850
70 % 1 1 39615
50 % 1 1 33936
40 % 1 1 29891
30 % 1 1 25248
Entity #6 | Chains: G
Cytochrome b6f complex subunit petG protein, length: 37 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 1 68464
95 % 1 1 47675
90 % 1 1 45373
70 % 1 1 40000
50 % 1 1 34260
40 % 1 1 30199
30 % 1 1 25554
Entity #7 | Chains: L
Cytochrome b6f complex subunit petL protein, length: 32 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 1 68789
95 % 1 1 47939
90 % 1 1 45612
70 % 1 1 40198
50 % 1 1 34429
40 % 1 1 30366
30 % 1 1 25721
Entity #8 | Chains: M
Cytochrome b6f complex subunit PETM protein, length: 39 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 1 68346
95 % 1 1 47564
90 % 1 1 45265
70 % 1 1 39909
50 % 1 1 34186
40 % 1 1 30129
30 % 1 1 25484
Entity #9 | Chains: N
Cytochrome b6f complex subunit PETN protein, length: 31 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 1 68864
95 % 1 1 48005
90 % 1 1 45671
70 % 1 1 40250
50 % 1 1 34477
40 % 1 1 30414
30 % 1 1 25769

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.