Sequence Similarity Clusters for the Entities in PDB 1Q90

Entity #1 | Chains: A
Apocytochrome f protein, length: 292 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 1 54111
95 % 1 1 38620
90 % 1 1 36958
70 % 1 1 32918
50 % 8 12 4236
40 % 8 12 4045
30 % 8 12 3727
Entity #2 | Chains: B
Cytochrome b6 protein, length: 215 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 1 58028
95 % 1 1 40626
90 % 1 1 38738
70 % 9 13 4159
50 % 9 13 4025
40 % 9 13 3853
30 % 9 13 3551
Entity #3 | Chains: C
Cytochrome B6-F complex iron-sulfur subunit protein, length: 127 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 1 64193
95 % 1 1 44101
90 % 1 1 41903
70 % 2 2 27796
50 % 3 3 17606
40 % 3 3 15698
30 % 3 3 13424
Entity #4 | Chains: D
Cytochrome b6-f complex subunit 4 protein, length: 159 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 1 61405
95 % 1 1 42480
90 % 1 1 40386
70 % 9 13 4187
50 % 9 13 4049
40 % 9 13 3878
30 % 9 13 3573
Entity #5 | Chains: R
Cytochrome B6-F complex iron-sulfur subunit protein, length: 49 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 1 70340
95 % 1 1 48833
90 % 1 1 46415
70 % 1 1 40884
50 % 1 1 34987
40 % 1 1 30816
30 % 1 1 26036
Entity #6 | Chains: G
Cytochrome b6f complex subunit petG protein, length: 37 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 1 70971
95 % 1 1 49399
90 % 1 1 46958
70 % 1 1 41285
50 % 1 1 35327
40 % 1 1 31138
30 % 1 1 26356
Entity #7 | Chains: L
Cytochrome b6f complex subunit petL protein, length: 32 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 1 71303
95 % 1 1 49669
90 % 1 1 47201
70 % 1 1 41487
50 % 1 1 35498
40 % 1 1 31307
30 % 1 1 26525
Entity #8 | Chains: M
Cytochrome b6f complex subunit PETM protein, length: 39 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 1 70847
95 % 1 1 49282
90 % 1 1 46844
70 % 1 1 41189
50 % 1 1 35248
40 % 1 1 31063
30 % 1 1 26281
Entity #9 | Chains: N
Cytochrome b6f complex subunit PETN protein, length: 31 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 1 71380
95 % 1 1 49736
90 % 1 1 47261
70 % 1 1 41540
50 % 1 1 35547
40 % 1 1 31356
30 % 1 1 26574

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.