Sequence Similarity Clusters for the Entities in PDB 1Q90

Entity #1 | Chains: A
Apocytochrome f protein, length: 292 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 1 56475
95 % 1 1 40338
90 % 1 1 38546
70 % 1 1 34228
50 % 8 12 4446
40 % 8 12 4232
30 % 8 12 3900
Entity #2 | Chains: B
Cytochrome b6 protein, length: 215 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 1 60544
95 % 1 1 42445
90 % 1 1 40401
70 % 9 13 4386
50 % 9 13 4215
40 % 9 13 4025
30 % 9 13 3716
Entity #3 | Chains: C
Cytochrome B6-F complex iron-sulfur subunit protein, length: 127 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 1 66958
95 % 1 1 46086
90 % 1 1 43712
70 % 2 2 28885
50 % 3 3 18288
40 % 3 3 16297
30 % 3 3 13941
Entity #4 | Chains: D
Cytochrome b6-f complex subunit 4 protein, length: 159 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 1 64058
95 % 1 1 44386
90 % 1 1 42126
70 % 9 13 4414
50 % 9 13 4241
40 % 9 13 4049
30 % 9 13 3739
Entity #5 | Chains: R
Cytochrome B6-F complex iron-sulfur subunit protein, length: 49 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 1 73306
95 % 1 1 50964
90 % 1 1 48364
70 % 1 1 42430
50 % 1 1 36194
40 % 1 1 31866
30 % 1 1 26942
Entity #6 | Chains: G
Cytochrome b6f complex subunit petG protein, length: 37 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 1 73950
95 % 1 1 51542
90 % 1 1 48919
70 % 1 1 42842
50 % 1 1 36543
40 % 1 1 32196
30 % 1 1 27270
Entity #7 | Chains: L
Cytochrome b6f complex subunit petL protein, length: 32 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 1 74292
95 % 1 1 51819
90 % 1 1 49169
70 % 1 1 43052
50 % 1 1 36720
40 % 1 1 32371
30 % 1 1 27445
Entity #8 | Chains: M
Cytochrome b6f complex subunit PETM protein, length: 39 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 1 73827
95 % 1 1 51426
90 % 1 1 48807
70 % 1 1 42749
50 % 1 1 36467
40 % 1 1 32125
30 % 1 1 27199
Entity #9 | Chains: N
Cytochrome b6f complex subunit PETN protein, length: 31 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 1 74369
95 % 1 1 51886
90 % 1 1 49229
70 % 1 1 43105
50 % 1 1 36769
40 % 1 1 32420
30 % 1 1 27494

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.