Sequence Similarity Clusters for the Entities in PDB 1Q90

Entity #1 | Chains: A
Apocytochrome f protein, length: 292 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 1 49311
95 % 1 1 35243
90 % 1 1 33782
70 % 1 1 30188
50 % 8 12 3849
40 % 8 12 3685
30 % 8 12 3415
Entity #2 | Chains: B
Cytochrome b6 protein, length: 215 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 1 52912
95 % 1 1 37122
90 % 1 1 35457
70 % 9 13 3764
50 % 9 13 3654
40 % 9 13 3503
30 % 9 13 3245
Entity #3 | Chains: C
Cytochrome B6-F complex iron-sulfur subunit protein, length: 127 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 1 58679
95 % 1 1 40368
90 % 1 1 38463
70 % 2 2 25402
50 % 3 3 16091
40 % 3 3 14389
30 % 3 3 12329
Entity #4 | Chains: D
Cytochrome b6-f complex subunit 4 protein, length: 159 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 1 56056
95 % 1 1 38854
90 % 1 1 37021
70 % 9 13 3786
50 % 9 13 3676
40 % 9 13 3527
30 % 9 13 3267
Entity #5 | Chains: R
Cytochrome B6-F complex iron-sulfur subunit protein, length: 49 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 1 64497
95 % 1 1 44870
90 % 1 1 42779
70 % 1 1 37909
50 % 1 1 32515
40 % 1 1 28675
30 % 1 1 24230
Entity #6 | Chains: G
Cytochrome b6f complex subunit petG protein, length: 37 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 1 65083
95 % 1 1 45398
90 % 1 1 43283
70 % 1 1 38275
50 % 1 1 32822
40 % 1 1 28966
30 % 1 1 24519
Entity #7 | Chains: L
Cytochrome b6f complex subunit petL protein, length: 32 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 1 65389
95 % 1 1 45647
90 % 1 1 43508
70 % 1 1 38465
50 % 1 1 32984
40 % 1 1 29125
30 % 1 1 24678
Entity #8 | Chains: M
Cytochrome b6f complex subunit PETM protein, length: 39 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 1 64971
95 % 1 1 45292
90 % 1 1 43181
70 % 1 1 38190
50 % 1 1 32753
40 % 1 1 28901
30 % 1 1 24454
Entity #9 | Chains: N
Cytochrome b6f complex subunit PETN protein, length: 31 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 1 65461
95 % 1 1 45710
90 % 1 1 43564
70 % 1 1 38516
50 % 1 1 33031
40 % 1 1 29172
30 % 1 1 24725

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.