Sequence Similarity Clusters for the Entities in PDB 1Q90

Entity #1 | Chains: A
Apocytochrome f protein, length: 292 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 1 51165
95 % 1 1 36510
90 % 1 1 34981
70 % 1 1 31247
50 % 8 12 4007
40 % 8 12 3833
30 % 8 12 3541
Entity #2 | Chains: B
Cytochrome b6 protein, length: 215 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 1 54890
95 % 1 1 38450
90 % 1 1 36708
70 % 9 13 3909
50 % 9 13 3803
40 % 9 13 3638
30 % 9 13 3363
Entity #3 | Chains: C
Cytochrome B6-F complex iron-sulfur subunit protein, length: 127 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 1 60843
95 % 1 1 41811
90 % 1 1 39797
70 % 2 2 26315
50 % 3 3 16649
40 % 3 3 14863
30 % 3 3 12715
Entity #4 | Chains: D
Cytochrome b6-f complex subunit 4 protein, length: 159 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 1 58145
95 % 1 1 40253
90 % 1 1 38321
70 % 9 13 3934
50 % 9 13 3824
40 % 9 13 3662
30 % 9 13 3384
Entity #5 | Chains: R
Cytochrome B6-F complex iron-sulfur subunit protein, length: 49 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 1 66801
95 % 1 1 46422
90 % 1 1 44205
70 % 1 1 39082
50 % 1 1 33489
40 % 1 1 29500
30 % 1 1 24925
Entity #6 | Chains: G
Cytochrome b6f complex subunit petG protein, length: 37 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 1 67403
95 % 1 1 46961
90 % 1 1 44721
70 % 1 1 39460
50 % 1 1 33807
40 % 1 1 29802
30 % 1 1 25225
Entity #7 | Chains: L
Cytochrome b6f complex subunit petL protein, length: 32 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 1 67724
95 % 1 1 47223
90 % 1 1 44958
70 % 1 1 39656
50 % 1 1 33974
40 % 1 1 29967
30 % 1 1 25390
Entity #8 | Chains: M
Cytochrome b6f complex subunit PETM protein, length: 39 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 1 67288
95 % 1 1 46853
90 % 1 1 44616
70 % 1 1 39372
50 % 1 1 33736
40 % 1 1 29735
30 % 1 1 25158
Entity #9 | Chains: N
Cytochrome b6f complex subunit PETN protein, length: 31 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 1 67800
95 % 1 1 47290
90 % 1 1 45018
70 % 1 1 39709
50 % 1 1 34023
40 % 1 1 30016
30 % 1 1 25439

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.