Sequence Similarity Clusters for the Entities in PDB 1Q90

Entity #1 | Chains: A
Apocytochrome f protein, length: 292 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 1 49902
95 % 1 1 35644
90 % 1 1 34150
70 % 1 1 30502
50 % 8 12 3897
40 % 8 12 3733
30 % 8 12 3455
Entity #2 | Chains: B
Cytochrome b6 protein, length: 215 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 1 53521
95 % 1 1 37532
90 % 1 1 35829
70 % 9 13 3811
50 % 9 13 3704
40 % 9 13 3546
30 % 9 13 3283
Entity #3 | Chains: C
Cytochrome B6-F complex iron-sulfur subunit protein, length: 127 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 1 59348
95 % 1 1 40814
90 % 1 1 38862
70 % 2 2 25664
50 % 3 3 16263
40 % 3 3 14540
30 % 3 3 12445
Entity #4 | Chains: D
Cytochrome b6-f complex subunit 4 protein, length: 159 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 1 56702
95 % 1 1 39286
90 % 1 1 37410
70 % 9 13 3833
50 % 9 13 3725
40 % 9 13 3571
30 % 9 13 3305
Entity #5 | Chains: R
Cytochrome B6-F complex iron-sulfur subunit protein, length: 49 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 1 65204
95 % 1 1 45351
90 % 1 1 43207
70 % 1 1 38256
50 % 1 1 32813
40 % 1 1 28934
30 % 1 1 24445
Entity #6 | Chains: G
Cytochrome b6f complex subunit petG protein, length: 37 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 1 65795
95 % 1 1 45883
90 % 1 1 43716
70 % 1 1 38627
50 % 1 1 33124
40 % 1 1 29229
30 % 1 1 24738
Entity #7 | Chains: L
Cytochrome b6f complex subunit petL protein, length: 32 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 1 66107
95 % 1 1 46138
90 % 1 1 43947
70 % 1 1 38819
50 % 1 1 33288
40 % 1 1 29390
30 % 1 1 24899
Entity #8 | Chains: M
Cytochrome b6f complex subunit PETM protein, length: 39 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 1 65682
95 % 1 1 45777
90 % 1 1 43613
70 % 1 1 38541
50 % 1 1 33055
40 % 1 1 29164
30 % 1 1 24673
Entity #9 | Chains: N
Cytochrome b6f complex subunit PETN protein, length: 31 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 1 66181
95 % 1 1 46203
90 % 1 1 44005
70 % 1 1 38871
50 % 1 1 33336
40 % 1 1 29438
30 % 1 1 24947

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.