Sequence Similarity Clusters for the Entities in PDB 1Q90

Entity #1 | Chains: A
Apocytochrome f protein, length: 292 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 1 52402
95 % 1 1 37372
90 % 1 1 35786
70 % 1 1 31934
50 % 8 12 4108
40 % 8 12 3924
30 % 8 12 3628
Entity #2 | Chains: B
Cytochrome b6 protein, length: 215 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 1 56210
95 % 1 1 39332
90 % 1 1 37530
70 % 9 13 4026
50 % 9 13 3905
40 % 9 13 3734
30 % 9 13 3454
Entity #3 | Chains: C
Cytochrome B6-F complex iron-sulfur subunit protein, length: 127 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 1 62258
95 % 1 1 42751
90 % 1 1 40662
70 % 2 2 26947
50 % 3 3 17079
40 % 3 3 15229
30 % 3 3 13021
Entity #4 | Chains: D
Cytochrome b6-f complex subunit 4 protein, length: 159 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 1 59524
95 % 1 1 41163
90 % 1 1 39166
70 % 9 13 4049
50 % 9 13 3927
40 % 9 13 3758
30 % 9 13 3476
Entity #5 | Chains: R
Cytochrome B6-F complex iron-sulfur subunit protein, length: 49 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 1 68319
95 % 1 1 47432
90 % 1 1 45125
70 % 1 1 39833
50 % 1 1 34116
40 % 1 1 30051
30 % 1 1 25381
Entity #6 | Chains: G
Cytochrome b6f complex subunit petG protein, length: 37 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 1 68933
95 % 1 1 47984
90 % 1 1 45654
70 % 1 1 40224
50 % 1 1 34446
40 % 1 1 30365
30 % 1 1 25693
Entity #7 | Chains: L
Cytochrome b6f complex subunit petL protein, length: 32 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 1 69259
95 % 1 1 48249
90 % 1 1 45894
70 % 1 1 40423
50 % 1 1 34615
40 % 1 1 30532
30 % 1 1 25860
Entity #8 | Chains: M
Cytochrome b6f complex subunit PETM protein, length: 39 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 1 68813
95 % 1 1 47871
90 % 1 1 45544
70 % 1 1 40131
50 % 1 1 34370
40 % 1 1 30293
30 % 1 1 25621
Entity #9 | Chains: N
Cytochrome b6f complex subunit PETN protein, length: 31 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 1 69334
95 % 1 1 48315
90 % 1 1 45953
70 % 1 1 40475
50 % 1 1 34663
40 % 1 1 30580
30 % 1 1 25908

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.