Sequence Similarity Clusters for the Entities in PDB 1Q84

Entity #1 | Chains: A,B
Acetylcholinesterase protein, length: 580 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 21 63 214
95 % 26 86 215 Flexibility: No
Max RMSD: 1.1, Avg RMSD: 0.4
PDBFlex
90 % 26 86 225
70 % 37 107 177
50 % 117 257 102
40 % 117 257 127
30 % 175 349 73

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures