Sequence Similarity Clusters for the Entities in PDB 1Q4K

Entity #1 | Chains: A,B,C
Serine/threonine-protein kinase PLK protein, length: 259 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 33 40 680
95 % 35 44 812 Flexibility: Low
Max RMSD: 4.1, Avg RMSD: 0.9
PDBFlex
90 % 35 44 842
70 % 36 45 849
50 % 36 45 903
40 % 36 45 925
30 % 37 47 858
Entity #2 | Chains: D,E,F
Phospho-peptide sequence Met.Gln.Ser.pThr.Pro.Leu protein, length: 6 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures