Sequence Similarity Clusters for the Entities in PDB 1Q4D

Entity #1 | Chains: A
Green Fluorescent Protein protein, length: 238 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 2 2 38872
95 % 126 230 74 Flexibility: Low
Max RMSD: 4.4, Avg RMSD: 0.6
PDBFlex
90 % 130 268 37
70 % 133 272 47
50 % 133 273 83
40 % 134 274 100
30 % 184 489 17

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.