Sequence Similarity Clusters for the Entities in PDB 1Q4D

Entity #1 | Chains: A
Green Fluorescent Protein protein, length: 238 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 2 2 39348
95 % 136 248 65 Flexibility: Low
Max RMSD: 4.4, Avg RMSD: 0.6
PDBFlex
90 % 140 287 36
70 % 143 291 43
50 % 143 292 80
40 % 144 293 96
30 % 196 513 17

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures