Sequence Similarity Clusters for the Entities in PDB 1Q4C

Entity #1 | Chains: A
Green Fluorescent Protein protein, length: 238 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 7 23 1104
95 % 125 272 69 Flexibility: Low
Max RMSD: 4.4, Avg RMSD: 0.6
PDBFlex
90 % 129 315 34
70 % 130 320 42
50 % 130 322 79
40 % 133 335 91
30 % 175 559 15

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures