Sequence Similarity Clusters for the Entities in PDB 1Q47

Entity #1 | Chains: A,B
Semaphorin 3A protein, length: 495 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 2 25377
95 % 1 2 21582 Flexibility: No
Max RMSD: 0.7, Avg RMSD: 0.5
PDBFlex
90 % 1 2 20973
70 % 1 2 19260
50 % 1 2 16736
40 % 1 2 14945
30 % 1 2 12825

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures