Sequence Similarity Clusters for the Entities in PDB 1Q47

Entity #1 | Chains: A,B
Semaphorin 3A protein, length: 495 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 2 28591
95 % 1 2 25002 Flexibility: No
Max RMSD: 0.7, Avg RMSD: 0.5
PDBFlex
90 % 1 2 24153
70 % 1 2 21918
50 % 1 2 18833
40 % 1 2 16635
30 % 1 2 13949

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures