Sequence Similarity Clusters for the Entities in PDB 1Q47

Entity #1 | Chains: A,B
Semaphorin 3A protein, length: 495 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 2 25072
95 % 1 2 21341 Flexibility: No
Max RMSD: 0.7, Avg RMSD: 0.5
PDBFlex
90 % 1 2 20740
70 % 1 2 19049
50 % 1 2 16563
40 % 1 2 14797
30 % 1 2 12694

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.