Sequence Similarity Clusters for the Entities in PDB 1Q46

Entity #1 | Chains: A
translation initiation factor 2 alpha subunit protein, length: 175 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 3 3 28484
95 % 3 3 24911 Flexibility: Low
Max RMSD: 0.9, Avg RMSD: 0.9
PDBFlex
90 % 3 3 24069
70 % 3 3 21841
50 % 4 4 15568
40 % 4 4 13830
30 % 4 4 11623

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures