Sequence Similarity Clusters for the Entities in PDB 1Q42

Entity #1 | Chains: A
MRNA TRANSPORT REGULATOR Mtr2 protein, length: 201 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 2 28595
95 % 1 2 23768 Flexibility: Low
Max RMSD: 1.0, Avg RMSD: 0.8
PDBFlex
90 % 1 2 22960
70 % 1 2 20954
50 % 1 2 18132
40 % 1 2 16148
30 % 1 2 13801

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures