Sequence Similarity Clusters for the Entities in PDB 1Q40

Entity #1 | Chains: A,C
MRNA TRANSPORT REGULATOR Mtr2 protein, length: 201 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 2 2 26518
95 % 2 2 22064
90 % 2 2 21357
70 % 2 2 19602
50 % 2 2 17033
40 % 2 2 15196
30 % 2 2 12995
Entity #2 | Chains: B,D
mRNA export factor MEX67 protein, length: 219 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 1 38311
95 % 1 1 29314
90 % 1 1 28210
70 % 1 1 25411
50 % 1 1 21766
40 % 1 2 15090
30 % 1 2 12909

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.