Sequence Similarity Clusters for the Entities in PDB 1Q3P

Entity #1 | Chains: A,B
Shank1 protein, length: 109 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 3 4 4875
95 % 3 4 5260 Flexibility: Low
Max RMSD: 1.4, Avg RMSD: 0.8
PDBFlex
90 % 3 4 5291
70 % 4 5 3052
50 % 4 5 2999
40 % 4 5 2922
30 % 177 325 114
Entity #2 | Chains: C,D
C-terminal hexapeptide from Guanylate kinase-associated protein protein, length: 6 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures


ACTION - (A) Select for download / view details OR (B) Select two chains for comparison
Rank PDB ID Entity ID Chains Description Details Taxonomy EC Number
1 1Q3O 1 A, B Shank1 PDZ domain 10116
2 3O5N 1 A, B, C, D, E, F, G, H SH3 and multiple ankyrin repeat domains protein 3 PDZ domain, residues 637-744 10090
3 3QJM 1 A, B SH3 and multiple ankyrin repeat domains protein 1 PDZ domain 10116
4 1Q3P 1 A, B Shank1 PDZ domain 10116
5 3QJN 1 A, B, C, D, E, F, G, H SH3 and multiple ankyrin repeat domains protein 1 PDZ domain 10116