Sequence Similarity Clusters for the Entities in PDB 1Q3P

Entity #1 | Chains: A,B
Shank1 protein, length: 109 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 3 4 4817
95 % 3 4 5207 Flexibility: Low
Max RMSD: 1.1, Avg RMSD: 0.7
PDBFlex
90 % 3 4 5235
70 % 4 5 3006
50 % 4 5 2963
40 % 4 5 2884
30 % 177 325 115
Entity #2 | Chains: C,D
C-terminal hexapeptide from Guanylate kinase-associated protein protein, length: 6 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures