Sequence Similarity Clusters for the Entities in PDB 1Q3O

Entity #1 | Chains: A,B
Shank1 protein, length: 109 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 4 4298
95 % 1 4 5100 Flexibility: Low
Max RMSD: 1.1, Avg RMSD: 0.7
PDBFlex
90 % 1 4 5122
70 % 1 5 2971
50 % 1 5 2928
40 % 1 5 2877
30 % 131 308 111

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures