Sequence Similarity Clusters for the Entities in PDB 1Q3E

Entity #1 | Chains: A,B
Potassium/sodium hyperpolarization-activated cyclic nucleotide-gated channel 2 protein, length: 207 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 4 10948
95 % 4 13 2940 Flexibility: Low
Max RMSD: 1.1, Avg RMSD: 0.6
PDBFlex
90 % 4 19 1789
70 % 4 19 1798
50 % 5 20 1769
40 % 5 20 1773
30 % 5 22 1533

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures