Sequence Similarity Clusters for the Entities in PDB 1Q39

Entity #1 | Chains: A
Endonuclease VIII protein, length: 262 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 4 4 19285
95 % 7 8 7386 Flexibility: Medium
Max RMSD: 8.9, Avg RMSD: 4.3
PDBFlex
90 % 7 8 7347
70 % 7 8 7146
50 % 7 8 6600
40 % 7 8 6141
30 % 69 71 677

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.