Sequence Similarity Clusters for the Entities in PDB 1Q34

Entity #1 | Chains: A,B,C
Ubiquitin-conjugating enzyme E2-21.5 kDa protein, length: 163 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 2 2 19418
95 % 2 2 17711 Flexibility: No
Max RMSD: 0.4, Avg RMSD: 0.3
PDBFlex
90 % 2 2 17285
70 % 5 7 7690
50 % 7 9 5118
40 % 147 178 181
30 % 157 192 186

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures