Sequence Similarity Clusters for the Entities in PDB 1Q2W

Entity #1 | Chains: A,B
nonstructural polyprotein pp1a protein, length: 308 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 17 61 342
95 % 20 90 278 Flexibility: Low
Max RMSD: 16.9, Avg RMSD: 2.3
PDBFlex
90 % 20 90 292
70 % 20 90 329
50 % 26 103 284
40 % 29 119 232
30 % 29 119 242

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.