Sequence Similarity Clusters for the Entities in PDB 1Q2D

Entity #1 | Chains: A
histone acetyltransferase GCN5 protein, length: 162 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 6 9 6427
95 % 6 9 7002 Flexibility: Low
Max RMSD: 1.7, Avg RMSD: 0.9
PDBFlex
90 % 6 9 6974
70 % 6 9 6763
50 % 11 14 3595
40 % 11 14 3470
30 % 11 14 3241
Entity #2 | Chains: B
19-mer peptide fragment from p53 Tumor Suppressor protein, length: 19 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.