Sequence Similarity Clusters for the Entities in PDB 1Q2C

Entity #1 | Chains: A
histone acetyltransferase GCN5 protein, length: 162 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 8 9 6688
95 % 8 9 7285 Flexibility: Low
Max RMSD: 1.7, Avg RMSD: 0.9
PDBFlex
90 % 8 9 7249
70 % 8 9 7051
50 % 14 16 1175
40 % 14 16 1189
30 % 14 16 1171
Entity #2 | Chains: B
Histone H4 peptide protein, length: 19 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures