Sequence Similarity Clusters for the Entities in PDB 1Q2C

Entity #1 | Chains: A
histone acetyltransferase GCN5 protein, length: 162 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 8 9 6825
95 % 8 9 7436 Flexibility: Low
Max RMSD: 1.7, Avg RMSD: 0.9
PDBFlex
90 % 8 9 7403
70 % 8 9 7193
50 % 14 16 1203
40 % 14 16 1212
30 % 14 16 1196
Entity #2 | Chains: B
Histone H4 peptide protein, length: 19 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures