Sequence Similarity Clusters for the Entities in PDB 1Q25

Entity #1 | Chains: A
cation-independent mannose 6-phosphate receptor protein, length: 432 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 3 15174
95 % 1 3 14320 Flexibility: Low
Max RMSD: 0.8, Avg RMSD: 0.7
PDBFlex
90 % 1 3 14092
70 % 1 3 13230
50 % 1 3 11781
40 % 1 3 10675
30 % 1 3 9307

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures