Sequence Similarity Clusters for the Entities in PDB 1Q25

Entity #1 | Chains: A
cation-independent mannose 6-phosphate receptor protein, length: 432 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 3 14564
95 % 1 3 13799 Flexibility: Low
Max RMSD: 0.8, Avg RMSD: 0.7
PDBFlex
90 % 1 3 13580
70 % 1 3 12769
50 % 1 3 11378
40 % 1 3 10323
30 % 1 3 9004

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.