Sequence Similarity Clusters for the Entities in PDB 1Q1M

Entity #1 | Chains: A
Protein-tyrosine phosphatase, non-receptor type 1 protein, length: 321 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 89 94 264
95 % 135 145 235 Flexibility: Low
Max RMSD: 3.6, Avg RMSD: 0.9
PDBFlex
90 % 135 145 247
70 % 135 145 282
50 % 135 146 311
40 % 135 146 325
30 % 238 261 161

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures