Sequence Similarity Clusters for the Entities in PDB 1Q0Y

Entity #1 | Chains: L
Fab 9B1, Light chain protein, length: 212 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 2 2 39877
95 % 2 2 30369 Flexibility: No
Max RMSD: 0.3, Avg RMSD: 0.3
PDBFlex
90 % 6 45 384
70 % 90 398 10
50 % 1001 4537 1
40 % 1001 4537 1
30 % 1099 5342 1
Entity #2 | Chains: H
Fab 9B1, Heavy chain protein, length: 221 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 1 58274
95 % 2 2 29860 Flexibility: No
Max RMSD: 0.3, Avg RMSD: 0.3
PDBFlex
90 % 2 2 28740
70 % 485 2197 1
50 % 1002 4537 1
40 % 1002 4537 1
30 % 1100 5342 1

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.