Sequence Similarity Clusters for the Entities in PDB 1Q0Y

Entity #1 | Chains: L
Fab 9B1, Light chain protein, length: 212 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 2 2 42007
95 % 2 2 31924 Flexibility: No
Max RMSD: 0.3, Avg RMSD: 0.3
PDBFlex
90 % 6 45 441
70 % 533 2426 1
50 % 1100 4913 1
40 % 1100 4913 1
30 % 1211 5780 1
Entity #2 | Chains: H
Fab 9B1, Heavy chain protein, length: 221 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 1 61157
95 % 2 2 31390 Flexibility: No
Max RMSD: 0.3, Avg RMSD: 0.3
PDBFlex
90 % 2 2 30182
70 % 533 2376 2
50 % 1101 4913 1
40 % 1101 4913 1
30 % 1212 5780 1

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures