Sequence Similarity Clusters for the Entities in PDB 1Q0Y

Entity #1 | Chains: L
Fab 9B1, Light chain protein, length: 212 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 2 2 42515
95 % 2 2 32297 Flexibility: No
Max RMSD: 0.3, Avg RMSD: 0.3
PDBFlex
90 % 6 45 458
70 % 550 2474 1
50 % 1135 5011 1
40 % 1135 5011 1
30 % 1282 5941 1
Entity #2 | Chains: H
Fab 9B1, Heavy chain protein, length: 221 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 1 61870
95 % 2 2 31758 Flexibility: No
Max RMSD: 0.3, Avg RMSD: 0.3
PDBFlex
90 % 2 2 30527
70 % 550 2424 2
50 % 1136 5011 1
40 % 1136 5011 1
30 % 1283 5941 1

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures