Sequence Similarity Clusters for the Entities in PDB 1Q0Y

Entity #1 | Chains: L
Fab 9B1, Light chain protein, length: 212 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 2 2 32977
95 % 2 2 28436 Flexibility: No
Max RMSD: 0.3, Avg RMSD: 0.3
PDBFlex
90 % 6 45 469
70 % 563 2553 1
50 % 1163 5180 1
40 % 1377 5834 1
30 % 1682 7269 1
Entity #2 | Chains: H
Fab 9B1, Heavy chain protein, length: 221 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 1 50247
95 % 2 2 28437 Flexibility: No
Max RMSD: 0.3, Avg RMSD: 0.3
PDBFlex
90 % 2 2 27325
70 % 564 2511 2
50 % 1164 5180 1
40 % 1378 5834 1
30 % 1683 7269 1

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures