Sequence Similarity Clusters for the Entities in PDB 1Q0Y

Entity #1 | Chains: L
Fab 9B1, Light chain protein, length: 212 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 2 2 41106
95 % 2 2 31294 Flexibility: No
Max RMSD: 0.3, Avg RMSD: 0.3
PDBFlex
90 % 6 45 396
70 % 504 2329 1
50 % 1040 4717 1
40 % 1040 4717 1
30 % 1146 5571 1
Entity #2 | Chains: H
Fab 9B1, Heavy chain protein, length: 221 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 1 59961
95 % 2 2 30771 Flexibility: No
Max RMSD: 0.3, Avg RMSD: 0.3
PDBFlex
90 % 2 2 29607
70 % 504 2282 2
50 % 1041 4717 1
40 % 1041 4717 1
30 % 1147 5571 1

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.