Sequence Similarity Clusters for the Entities in PDB 1Q0X

Entity #1 | Chains: L
Fab 9B1, light chain protein, length: 212 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 2 32757
95 % 1 2 28263 Flexibility: No
Max RMSD: 0.3, Avg RMSD: 0.3
PDBFlex
90 % 1 45 468
70 % 154 2519 1
50 % 322 5107 1
40 % 410 5756 1
30 % 493 7175 1
Entity #2 | Chains: H
Fab 9B1, heavy chain protein, length: 221 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 1 55860
95 % 1 2 28264 Flexibility: No
Max RMSD: 0.3, Avg RMSD: 0.3
PDBFlex
90 % 1 2 27171
70 % 156 2478 2
50 % 323 5107 1
40 % 411 5756 1
30 % 494 7175 1

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures