Sequence Similarity Clusters for the Entities in PDB 1Q0X

Entity #1 | Chains: L
Fab 9B1, light chain protein, length: 212 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 2 41309
95 % 1 2 31455 Flexibility: No
Max RMSD: 0.3, Avg RMSD: 0.3
PDBFlex
90 % 1 45 417
70 % 141 2362 1
50 % 295 4781 1
40 % 295 4781 1
30 % 315 5635 1
Entity #2 | Chains: H
Fab 9B1, heavy chain protein, length: 221 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 1 60243
95 % 1 2 30928 Flexibility: No
Max RMSD: 0.3, Avg RMSD: 0.3
PDBFlex
90 % 1 2 29746
70 % 143 2311 2
50 % 296 4781 1
40 % 296 4781 1
30 % 316 5635 1

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures