Sequence Similarity Clusters for the Entities in PDB 1Q0X

Entity #1 | Chains: L
Fab 9B1, light chain protein, length: 212 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 2 40794
95 % 1 2 31070 Flexibility: No
Max RMSD: 0.3, Avg RMSD: 0.3
PDBFlex
90 % 1 45 389
70 % 135 2287 1
50 % 283 4633 1
40 % 283 4633 1
30 % 303 5461 1
Entity #2 | Chains: H
Fab 9B1, heavy chain protein, length: 221 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 1 59486
95 % 1 2 30555 Flexibility: No
Max RMSD: 0.3, Avg RMSD: 0.3
PDBFlex
90 % 1 2 29394
70 % 138 2244 2
50 % 284 4633 1
40 % 284 4633 1
30 % 304 5461 1

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.