Sequence Similarity Clusters for the Entities in PDB 1Q0X

Entity #1 | Chains: L
Fab 9B1, light chain protein, length: 212 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 2 40206
95 % 1 2 30606 Flexibility: No
Max RMSD: 0.3, Avg RMSD: 0.3
PDBFlex
90 % 1 45 385
70 % 134 2264 1
50 % 281 4587 1
40 % 281 4587 1
30 % 301 5394 1
Entity #2 | Chains: H
Fab 9B1, heavy chain protein, length: 221 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 1 58713
95 % 1 2 30096 Flexibility: No
Max RMSD: 0.3, Avg RMSD: 0.3
PDBFlex
90 % 1 2 28966
70 % 137 2222 2
50 % 282 4587 1
40 % 282 4587 1
30 % 302 5394 1

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.