Sequence Similarity Clusters for the Entities in PDB 1Q0W

Entity #1 | Chains: A
Vacuolar protein sorting-associated protein VPS27 protein, length: 24 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 1 69233
95 % 1 1 48330
90 % 1 1 45978
70 % 1 1 40509
50 % 1 1 34730
40 % 1 1 30670
30 % 1 1 26036
Entity #2 | Chains: B
Ubiquitin protein, length: 76 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 8 9 4963
95 % 329 333 5
90 % 340 346 6
70 % 362 368 8
50 % 382 389 12
40 % 401 411 15
30 % 821 902 9

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.