Sequence Similarity Clusters for the Entities in PDB 1Q0W

Entity #1 | Chains: A
Vacuolar protein sorting-associated protein VPS27 protein, length: 24 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 2 2 47772
95 % 2 2 35768
90 % 2 2 34202
70 % 2 2 30527
50 % 2 2 26189
40 % 2 2 23181
30 % 2 2 19734
Entity #2 | Chains: B
Ubiquitin protein, length: 76 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 11 12 2475
95 % 360 364 5
90 % 384 390 6
70 % 404 410 8
50 % 424 431 12
40 % 444 454 15
30 % 889 970 9

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.