Sequence Similarity Clusters for the Entities in PDB 1Q0W

Entity #1 | Chains: A
Vacuolar protein sorting-associated protein VPS27 protein, length: 24 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 2 2 48851
95 % 2 2 36574
90 % 2 2 34940
70 % 2 2 31134
50 % 2 2 26681
40 % 2 2 23607
30 % 2 2 20103
Entity #2 | Chains: B
Ubiquitin protein, length: 76 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 12 13 2288
95 % 376 380 5
90 % 401 407 6
70 % 421 427 8
50 % 441 448 12
40 % 462 472 16
30 % 938 1019 9

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.