Sequence Similarity Clusters for the Entities in PDB 1Q0W

Entity #1 | Chains: A
Vacuolar protein sorting-associated protein VPS27 protein, length: 24 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 1 70533
95 % 1 1 49236
90 % 1 1 46825
70 % 1 1 41203
50 % 1 1 35317
40 % 1 1 31196
30 % 1 1 26498
Entity #2 | Chains: B
Ubiquitin protein, length: 76 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 8 9 5054
95 % 331 335 5
90 % 351 357 6
70 % 366 372 8
50 % 386 393 12
40 % 405 415 15
30 % 833 914 9

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.