Sequence Similarity Clusters for the Entities in PDB 1Q0W

Entity #1 | Chains: A
Vacuolar protein sorting-associated protein VPS27 protein, length: 24 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 2 2 49504
95 % 2 2 37055
90 % 2 2 35394
70 % 2 2 31511
50 % 2 2 26985
40 % 2 2 23876
30 % 2 2 20343
Entity #2 | Chains: B
Ubiquitin protein, length: 76 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 13 14 2114
95 % 389 393 5
90 % 414 420 6
70 % 437 443 8
50 % 457 464 11
40 % 478 488 16
30 % 959 1040 9

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.