Sequence Similarity Clusters for the Entities in PDB 1Q0V

Entity #1 | Chains: A
hydrophilic protein; has cysteine rich putative zinc finger essential for function; Vps27p protein, length: 81 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 1 58791
95 % 1 1 48077
90 % 1 1 45656
70 % 1 1 40080
50 % 1 1 33998
40 % 1 1 29783
30 % 1 1 24870

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures