Sequence Similarity Clusters for the Entities in PDB 1Q0T

Entity #1 | Chains: C,D
5'-D(*AP*CP*AP*GP*GP*AP*TP*CP*CP*TP*GP*T)-3' dna, length: 12 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
Entity #2 | Chains: A,B
DNA adenine methylase protein, length: 259 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 2 2 26848
95 % 5 5 4370 Flexibility: Low
Max RMSD: 2.9, Avg RMSD: 1.0
PDBFlex
90 % 5 5 4394
70 % 5 5 4324
50 % 5 5 4166
40 % 5 5 3978
30 % 5 5 3672

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.