Sequence Similarity Clusters for the Entities in PDB 1Q0T

Entity #1 | Chains: C,D
5'-D(*AP*CP*AP*GP*GP*AP*TP*CP*CP*TP*GP*T)-3' dna, length: 12 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
Entity #2 | Chains: A,B
DNA adenine methylase protein, length: 259 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 2 2 26548
95 % 5 5 4748 Flexibility: Low
Max RMSD: 2.9, Avg RMSD: 1.0
PDBFlex
90 % 5 5 4656
70 % 5 5 4539
50 % 5 5 4520
40 % 5 5 4265
30 % 5 5 3853

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures