Sequence Similarity Clusters for the Entities in PDB 1Q0Q

Entity #1 | Chains: A,B
1-deoxy-D-xylulose 5-phosphate reductoisomerase protein, length: 406 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 15 1979
95 % 1 15 2291 Flexibility: Low
Max RMSD: 5.1, Avg RMSD: 1.3
PDBFlex
90 % 1 15 2349
70 % 1 17 1868
50 % 1 29 1026
40 % 13 64 489
30 % 13 66 474

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures