Sequence Similarity Clusters for the Entities in PDB 1Q04

Entity #1 | Chains: A,B
Heparin-binding growth factor 1 protein, length: 146 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 3 13697
95 % 26 98 151 Flexibility: Low
Max RMSD: 3.9, Avg RMSD: 0.7
PDBFlex
90 % 27 101 152
70 % 27 102 175
50 % 45 142 170
40 % 45 143 182
30 % 45 144 201

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures