Sequence Similarity Clusters for the Entities in PDB 1PZU

Entity #1 | Chains: T,V,X
5'-D(*TP*TP*GP*AP*GP*GP*AP*AP*TP*TP*TP*CP*CP*A)-3' dna, length: 14 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
Entity #2 | Chains: W,Y,Z
5'-D(*AP*AP*TP*GP*GP*AP*AP*AP*TP*TP*CP*CP*TP*C)-3' dna, length: 14 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
Entity #3 | Chains: B,D,H,I,L,M
Nuclear factor of activated T-cells, cytoplasmic 2 protein, length: 301 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 7 7 2051
95 % 8 8 2406
90 % 8 8 2450
70 % 8 8 2437
50 % 8 8 2400
40 % 9 9 2143
30 % 9 9 2048

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.