Sequence Similarity Clusters for the Entities in PDB 1PZL

Entity #1 | Chains: A
Hepatocyte nuclear factor 4-alpha protein, length: 237 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 2 3 12725
95 % 2 4 6990 Flexibility: Medium
Max RMSD: 7.2, Avg RMSD: 4.2
PDBFlex
90 % 2 4 6965
70 % 2 5 6205
50 % 2 5 5810
40 % 30 94 283
30 % 478 992 10
Entity #2 | Chains: B
steroid receptor coactivator-1 protein, length: 14 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.