Sequence Similarity Clusters for the Entities in PDB 1PZL

Entity #1 | Chains: A
Hepatocyte nuclear factor 4-alpha protein, length: 237 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 2 3 12993
95 % 2 4 7123 Flexibility: Medium
Max RMSD: 7.2, Avg RMSD: 4.2
PDBFlex
90 % 2 4 7098
70 % 2 5 6314
50 % 2 5 5915
40 % 30 94 291
30 % 484 1006 10
Entity #2 | Chains: B
steroid receptor coactivator-1 protein, length: 14 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures