Sequence Similarity Clusters for the Entities in PDB 1PZJ

Entity #1 | Chains: D,E,F,G,H
Cholera Toxin B Subunit protein, length: 103 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 8 21 253
95 % 11 32 207 Flexibility: No
Max RMSD: 1.3, Avg RMSD: 0.4
PDBFlex
90 % 12 55 77
70 % 12 58 84
50 % 12 58 117
40 % 12 58 140
30 % 12 58 145

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.