Sequence Similarity Clusters for the Entities in PDB 1PZH

Entity #1 | Chains: A,B,C,D
lactate dehydrogenase protein, length: 331 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 2 5 3789
95 % 2 5 4150 Flexibility: No
Max RMSD: 2.0, Avg RMSD: 0.5
PDBFlex
90 % 2 5 4202
70 % 6 16 1081
50 % 30 70 275
40 % 47 178 57
30 % 67 244 44

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures


ACTION - (A) Select for download / view details OR (B) Select two chains for comparison
Rank PDB ID Entity ID Chains Description Details Taxonomy EC Number
1 1PZG 1 A, B, C, D lactate dehydrogenase 5811 1.1.1.27 | Details
2 1PZH 1 A, B, C, D lactate dehydrogenase 5811 1.1.1.27 | Details
3 1PZE 1 A lactate dehydrogenase 5811 1.1.1.27 | Details
4 3OM9 1 A, B, C, D Lactate dehydrogenase 5811 1.1.1.27 | Details
5 1PZF 1 A, B, C, D lactate dehydrogenase 5811 1.1.1.27 | Details