Sequence Similarity Clusters for the Entities in PDB 1PZH

Entity #1 | Chains: A,B,C,D
lactate dehydrogenase protein, length: 331 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 2 5 3724
95 % 2 5 4091 Flexibility: No
Max RMSD: 2.0, Avg RMSD: 0.5
PDBFlex
90 % 2 5 4144
70 % 6 16 1071
50 % 30 70 265
40 % 47 170 83
30 % 67 233 46

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures


ACTION - (A) Select for download / view details OR (B) Select two chains for comparison
Rank PDB ID Entity ID Chains Description Details Taxonomy EC Number
1 4PLG 1 A, B lactate dehydrogenase 5794
2 4PLF 1 A, B lactate dehydrogenase 5794
3 4PLC 1 A, B, C, D lactate dehydrogenase 5794
4 1PZG 1 A, B, C, D lactate dehydrogenase 5811 1.1.1.27 | Details
5 4PLT 1 A, B, C, D malate dehydrogenase 5794
6 1PZH 1 A, B, C, D lactate dehydrogenase 5811 1.1.1.27 | Details
7 4PLW 1 A, B, C, D malate dehydrogenase 5794
8 1SOV 1 A, B L-lactate dehydrogenase 5811 1.1.1.27 | Details
9 4PLH 1 A, B, C, D malate dehydrogenase 5794
10 1SOW 1 A, B L-lactate dehydrogenase 5811 1.1.1.27 | Details
11 4PLV 1 A, B, C, D malate dehydrogenase 5794
12 4PLY 1 A, B, C, D, E, F, G, H malate dehydrogenase 5794
13 1PZE 1 A lactate dehydrogenase 5811 1.1.1.27 | Details
14 3OM9 1 A, B, C, D Lactate dehydrogenase 5811 1.1.1.27 | Details
15 1PZF 1 A, B, C, D lactate dehydrogenase 5811 1.1.1.27 | Details
16 3CZM 1 A, B L-lactate dehydrogenase 5811 1.1.1.27 | Details