Sequence Similarity Clusters for the Entities in PDB 1PZF

Entity #1 | Chains: A,B,C,D
lactate dehydrogenase protein, length: 331 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 5 5 2999
95 % 5 5 3721 Flexibility: No
Max RMSD: 2.0, Avg RMSD: 0.5
PDBFlex
90 % 5 5 3778
70 % 15 16 994
50 % 51 69 270
40 % 90 160 70
30 % 123 221 43

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.