Sequence Similarity Clusters for the Entities in PDB 1PZ5

Entity #1 | Chains: A
Light chain of Fab (SYA/J6) protein, length: 215 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 4 19590
95 % 33 142 144
90 % 33 147 149
70 % 255 1729 2
50 % 631 4220 1
40 % 631 4221 1
30 % 681 4972 1
Entity #2 | Chains: B
Heavy chain of Fab (SYA/J6) protein, length: 220 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 1 55781
95 % 1 4 16959
90 % 1 4 16597
70 % 308 2041 1
50 % 632 4220 1
40 % 632 4221 1
30 % 682 4972 1
Entity #3 | Chains: C
Octapeptide (MDWNMHAA) protein, length: 8 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.