Sequence Similarity Clusters for the Entities in PDB 1PZ5

Entity #1 | Chains: A
Light chain of Fab (SYA/J6) protein, length: 215 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 4 19381
95 % 33 138 145
90 % 33 143 150
70 % 255 1710 2
50 % 630 4166 1
40 % 630 4167 1
30 % 680 4915 1
Entity #2 | Chains: B
Heavy chain of Fab (SYA/J6) protein, length: 220 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 1 55245
95 % 1 4 16772
90 % 1 4 16414
70 % 308 2016 1
50 % 631 4166 1
40 % 631 4167 1
30 % 681 4915 1
Entity #3 | Chains: C
Octapeptide (MDWNMHAA) protein, length: 8 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.