Sequence Similarity Clusters for the Entities in PDB 1PYY

Entity #1 | Chains: A
Penicillin-binding protein 2X protein, length: 702 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 2 3 28631
95 % 2 5 13823 Flexibility: Low
Max RMSD: 2.6, Avg RMSD: 1.5
PDBFlex
90 % 2 5 13582
70 % 2 6 7370
50 % 3 7 6149
40 % 3 7 5704
30 % 3 7 5025

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures