Sequence Similarity Clusters for the Entities in PDB 1PYY

Entity #1 | Chains: A
Penicillin-binding protein 2X protein, length: 702 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 1 50563
95 % 2 5 11057 Flexibility: Low
Max RMSD: 2.6, Avg RMSD: 1.5
PDBFlex
90 % 2 5 10908
70 % 2 6 6430
50 % 3 7 5674
40 % 3 7 5335
30 % 3 7 4790

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures