Sequence Similarity Clusters for the Entities in PDB 1PYU

Entity #1 | Chains: A,C
Aspartate 1-decarboxylase beta chain protein, length: 41 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 4 5 9743
95 % 4 5 9804 Flexibility: Low
Max RMSD: 3.5, Avg RMSD: 0.9
PDBFlex
90 % 4 5 9692
70 % 4 5 9204
50 % 4 5 8332
40 % 4 5 7644
30 % 4 5 6754
Entity #2 | Chains: B,D
Aspartate 1-decarboxylase alfa chain protein, length: 102 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 3 3 13652
95 % 5 7 5983 Flexibility: Low
Max RMSD: 6.0, Avg RMSD: 0.9
PDBFlex
90 % 5 7 5973
70 % 5 7 5837
50 % 5 7 5470
40 % 9 12 3506
30 % 9 12 3282

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.