Sequence Similarity Clusters for the Entities in PDB 1PYU

Entity #1 | Chains: A,C
Aspartate 1-decarboxylase beta chain protein, length: 41 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 5 6 7559
95 % 5 6 8131 Flexibility: Low
Max RMSD: 3.5, Avg RMSD: 0.9
PDBFlex
90 % 5 6 8083
70 % 5 6 7812
50 % 5 6 7194
40 % 5 6 6688
30 % 5 6 5965
Entity #2 | Chains: B,D
Aspartate 1-decarboxylase alfa chain protein, length: 102 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 4 4 10851
95 % 6 8 5236 Flexibility: Low
Max RMSD: 3.6, Avg RMSD: 0.8
PDBFlex
90 % 6 8 5257
70 % 6 8 5173
50 % 6 8 4949
40 % 10 13 3418
30 % 10 13 3193

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.