Sequence Similarity Clusters for the Entities in PDB 1PYU

Entity #1 | Chains: A,C
Aspartate 1-decarboxylase beta chain protein, length: 41 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 5 6 7457
95 % 5 6 8030 Flexibility: Low
Max RMSD: 3.5, Avg RMSD: 0.9
PDBFlex
90 % 5 6 7987
70 % 5 6 7732
50 % 5 6 7116
40 % 5 6 6614
30 % 5 6 5899
Entity #2 | Chains: B,D
Aspartate 1-decarboxylase alfa chain protein, length: 102 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 4 4 10713
95 % 6 8 5162 Flexibility: Low
Max RMSD: 6.0, Avg RMSD: 1.1
PDBFlex
90 % 6 8 5179
70 % 6 8 5107
50 % 6 8 4884
40 % 10 13 3388
30 % 10 13 3165

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.