Sequence Similarity Clusters for the Entities in PDB 1PYO

Entity #1 | Chains: A,C
Caspase-2 protein, length: 167 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 2 22049
95 % 1 9 2812
90 % 1 9 2855
70 % 1 9 2821
50 % 1 9 2783
40 % 1 9 2749
30 % 1 9 2575
Entity #2 | Chains: B,D
Caspase-2 protein, length: 105 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 8 2541
95 % 1 9 2835 Flexibility: Low
Max RMSD: 1.5, Avg RMSD: 0.6
PDBFlex
90 % 1 9 2877
70 % 1 9 2838
50 % 1 9 2803
40 % 1 9 2770
30 % 6 83 324
Entity #3 | Chains: E,F
ACETYL-LEU-ASP-GLU-SER-ASJ protein, length: 6 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.