Sequence Similarity Clusters for the Entities in PDB 1PYO

Entity #1 | Chains: A,C
Caspase-2 protein, length: 167 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 2 21170
95 % 1 9 2708
90 % 1 9 2754
70 % 1 9 2721
50 % 1 9 2684
40 % 1 9 2657
30 % 1 9 2485
Entity #2 | Chains: B,D
Caspase-2 protein, length: 105 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 8 2433
95 % 1 9 2731
90 % 1 9 2775
70 % 1 9 2738
50 % 1 9 2703
40 % 1 9 2677
30 % 6 83 315
Entity #3 | Chains: E,F
ACETYL-LEU-ASP-GLU-SER-ASJ protein, length: 6 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.