Sequence Similarity Clusters for the Entities in PDB 1PYM

Entity #1 | Chains: A,B
PROTEIN (PHOSPHOENOLPYRUVATE MUTASE) protein, length: 295 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 2 5 5889
95 % 2 6 5276 Flexibility: Low
Max RMSD: 2.3, Avg RMSD: 1.1
PDBFlex
90 % 2 6 5305
70 % 2 6 5190
50 % 2 6 4960
40 % 2 9 3861
30 % 6 25 593

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures